| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0813 |
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| Symbol | |
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| ID | 3755730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 833077 |
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| End bp | 836121 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637781678 |
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| Product | formate dehydrogenase alpha subunit |
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| Protein accession | YP_387309 |
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| Protein GI | 78355860 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACATCA GCCGGCGTAG TTTTATAAAG GCCACCGCGG CAAGCGGCAT CGCTGCCGCA
TTCGGCGGAC TGGGTCTGTC GCTTGTTCCC TCCGTATCAC AGGCAAAACT GCTGCCCCTG
CGCTGGGCAA AACAGACCAC CTCGGTCTGC TGTTTCTGTG CCGTGGGATG CGGACTGCTG
GTACACACCG ACAAAACATC GCACCGCGCC GTAAACGTGG AAGGCAACCC CGACCACCCC
GTCAACGAAG GTTCACTCTG CTCCAAAGGG GCCTCTATCT ATCAGGTGGC CGAAAATGCT
GAACGGCCCG CAACGCCCAT GTACCGCGCT CCCTACAGTG ACGCGTGGCA GCCTGTCTCT
TGGGACTGGG CACTGACCGA AATTGCCAGA CGCATAAAAA AAGACCGTGA TGCTTCCTTC
CGCTTTCAGA ATGACATGGG GCTGACAGTG AACCGCTGCG ACGGTATCGC CTCTGTGGGC
TCGGCGGCGC TGGATAACGA AGAATGCTGG GTGTTCCAGT CCATCCTGCG CGCGCTGGGA
CTTGTCTGGA TAGAACATCA GGCACGCATC TGCCACAGCT CCACGGTTCC TGCACTGGCG
GAATCTTTCG GGCGGGGCGC CATGACCAAC CACTGGAACG ATATACAGCA CAGTGACTGC
GTGCTGGTGA TGGGCAGCAA TGCGGCGGAA AACCATCCCA TATCATTCAA ATGGGTGCTG
CGTGCCATGG AAAAAGGGGC AAAGCTTATC AGCATCGACC CGCGCTTCAC CCGCACATCG
GCCAAGGCCG ACCTGTATGT GCAGATACGC GCCGGTACCG ACATCGCCGT GCTGGGCGGG
CTTATCAACT ACATCATCGA AAACGACCTG ATCCAGCGCG ACTATGTGGT CAGCCACACC
AACGCGCCGT TCCTCGTGTC CGATTCGTTC TCTTTCAAGG ACGGGCTGTT CAGCGGATAC
AAGGCAGGCA GCAAGGACAG CCATTATCAG GGGCGCTACA ACAAGTCCCT GTGGGATTTT
GCCAAGGACG AAAACGGGCT GCCGCTGAAA GATGAAACCC TGGCGCACCC GCGCTGCGTA
TACCAGCTGC TCAAAAAACA CTACTCGCGC TATGACATAG ACACAGTGGT CAGCGTGAGC
GGCGCGGACA AGCAGGGCCT GCTGGAATTT TACCGCCAGT ATGCCGCCAC CGGCAAGCCG
GACAAGGCAG GCACCATAAT GTACGCCATG GGCTGGACAC AGCACACGGT GGGCACCCAG
TACATACGCA CCATGGCTAT GGTGCAGCTG CTGCTGGGCA ACATCGGCGT GGCCGGAGGC
GGAGTGAACG CCCTGCGCGG CGAATCGAAC GTGCAGGGGT CCACGGACCA CGCGCTGCTC
TGGCAGAGCC TGCCCGGTTA CCTTGCCGTG CCCGACGCCA CCCATACATC GTACAAAAAG
CATCTTGAAA TAAAAACCGC CCCCCATCTG GCAGCGGCCA AAGATCCCAA AAGCGCCGCA
TGGTGGCAGT ATTACCCCAA ATACATGGCC AGCTTTCTCA AATCCATGTA TCCGCAGGCA
GAGCTTGCCG ATGCATATAA CTGGCTGCCC AAGGCCGATC AGGGAAAAAC CTACACATGG
CTCGAGCTGT TTGACGCCAT GCACGACGGC GAATTCAAGG GGTTCTTCGC CTGGGGACAG
AACCCCGCCT GTTCCGGCGC CCACGCCGGA AAAAACCGCG AAGCCATGGC GAAACTGGAC
TGGATGGTCA ACGTCAATAT TTTTGACAAT GAAACAGGCT CGTTCTGGCG CGGTCCGGGC
ATGCAGCCCG AAAAGATCAA GACGGAAGTA TTCTTTCTGC CCTGCTGTGT ATCCATAGAA
AAAGAAGGCT CCATCACCAA CTCGGGCCGG TGGATGCAGT GGCGCTATGC AGGCCCCGAC
CCGAGAGGCG CCGCCAGATC CGACGGGCAT ATAATGGTTG AACTGATGGA GAAAGTCCGT
GCTCTGTACG CAGAAGAAGG CGGTACCTTC ACCGCGCCCA TCGAAGCGCT TTCGCTGGAT
ATGTGGCGTG ACCAAAAAGG CTACAACCCG CATAACGTGG CCAGACTCAT CAACGGCACA
TTCCTGCGGG ACGTGACCAT CAAGGGCACT ACCTACAAAA AAGGCCAGCA GGTGCCCAGT
TTTGCGCTGC TGCAGGACGA CGGCTCGACC TGCTCCGGCA ACTGGCTGTA CTGCGCTTCG
TACACCGATG AAGGCAACAT GGGCGAACGC CAGAGCAGGC AGCAGAGCCC GGAACAGGAA
AAGCTCGGCC TTTTCCCCAA CTGGACATGG TGCTGGCCGC TCAACAGGCG CATACTGTAC
AACCGCGCTT CCTGCGACCT GACAGGCAAG CCCTATAACC CGCAGATGCC CGTCATCAGC
TGGACAGGCG AAAAATGGAC AGGCGACGTA CCCGACGGCG GCTGGAAACC CGGAGAAAAA
TACTCGTTCA TCATGAAGCC GCACGGCCAC GGACGCATCT ACGGCCCCGG ACTGGAAGAC
GGGCCCTTCC CCGAGCACTA CGAACCCATG GAAACCCCGC TCAAATCGCA TCCGCTCTCG
CGCCAGCGCA GCAATCCGGC CTGCCTGTCC TTCAATGACG AATACAAGGC CGTGGCAGAC
CCGAAATTCC CTTATGTGGC AACCACATTC AGGGTTACCG AACACTGGCA GACGGGCCTT
ATGACCCGCC ACATGCCCTG GCTGCTGGAA GCACAGCCGC AGATGTTTGT GGAGCTGAGC
GAAGAACTGG CCCGGAAGCT GGGCGTAGGT AACGGTGACA AGGTTGTAGT GGAAAGCGCA
CGCGGCAGCA TCTGGGCAGT GGGCATGGTG ACTGAACGCG TCAAGCCGCT CAGAATTCTG
GGTAAAACCG TGCACCAGAT AAGCATGCCG TGGTGTTTCG GCTGGTTCAT GCCGCACGAC
GGCAGCGGGG GAGATTCCTC CAACCTGCTT ACAGCGGCCG TGGGCGACGC CAATACCGGC
ATTCCCGAAA CCAAGGTCTT CATGGCCAAT GTGCGCAAGG CGTAA
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| Protein sequence | MHISRRSFIK ATAASGIAAA FGGLGLSLVP SVSQAKLLPL RWAKQTTSVC CFCAVGCGLL
VHTDKTSHRA VNVEGNPDHP VNEGSLCSKG ASIYQVAENA ERPATPMYRA PYSDAWQPVS
WDWALTEIAR RIKKDRDASF RFQNDMGLTV NRCDGIASVG SAALDNEECW VFQSILRALG
LVWIEHQARI CHSSTVPALA ESFGRGAMTN HWNDIQHSDC VLVMGSNAAE NHPISFKWVL
RAMEKGAKLI SIDPRFTRTS AKADLYVQIR AGTDIAVLGG LINYIIENDL IQRDYVVSHT
NAPFLVSDSF SFKDGLFSGY KAGSKDSHYQ GRYNKSLWDF AKDENGLPLK DETLAHPRCV
YQLLKKHYSR YDIDTVVSVS GADKQGLLEF YRQYAATGKP DKAGTIMYAM GWTQHTVGTQ
YIRTMAMVQL LLGNIGVAGG GVNALRGESN VQGSTDHALL WQSLPGYLAV PDATHTSYKK
HLEIKTAPHL AAAKDPKSAA WWQYYPKYMA SFLKSMYPQA ELADAYNWLP KADQGKTYTW
LELFDAMHDG EFKGFFAWGQ NPACSGAHAG KNREAMAKLD WMVNVNIFDN ETGSFWRGPG
MQPEKIKTEV FFLPCCVSIE KEGSITNSGR WMQWRYAGPD PRGAARSDGH IMVELMEKVR
ALYAEEGGTF TAPIEALSLD MWRDQKGYNP HNVARLINGT FLRDVTIKGT TYKKGQQVPS
FALLQDDGST CSGNWLYCAS YTDEGNMGER QSRQQSPEQE KLGLFPNWTW CWPLNRRILY
NRASCDLTGK PYNPQMPVIS WTGEKWTGDV PDGGWKPGEK YSFIMKPHGH GRIYGPGLED
GPFPEHYEPM ETPLKSHPLS RQRSNPACLS FNDEYKAVAD PKFPYVATTF RVTEHWQTGL
MTRHMPWLLE AQPQMFVELS EELARKLGVG NGDKVVVESA RGSIWAVGMV TERVKPLRIL
GKTVHQISMP WCFGWFMPHD GSGGDSSNLL TAAVGDANTG IPETKVFMAN VRKA
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