| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0712 |
|---|
| Symbol | |
|---|
| ID | 3755824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 730242 |
|---|
| End bp | 731684 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637781577 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_387208 |
|---|
| Protein GI | 78355759 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGCCC CTGACCGCCG GTGTGGCACA TATGCCGCAG ACGCTGCCGT CAGCAGATGC
CGCGCCCGCC AACGCCATAC TTTCCGCGGA GGTCCCGTGA CGTTTTTTCC GGCCCTGTCC
TCTGTATCCC GCCCGCACAA CACCCGCGTC CGCGGCGCAT TATCCTTTGT ACTGACTGTG
CTGCTGGTGC TGCTGCCTGC GGCAGGCTGC GACCGCACGC GGGATACCGC GCAAGAAAGC
CGCTCCCGCA CAGGCATCTC TGACACGGAA ATACGGTTCG GCTCATCGCT GCCCCTTACC
GGCCATGCCA GCTATCTGGG CATACAGACC ATGCGCGGCG CACTCAGCTA TATTAAATAC
ATAAATGAAA ACGGTGGCAT ACACGGGCGA CGCATTGTTC TTGATGTACG GGACGACGGG
TACGACCCGC CCCGCTGTCT TGCCAACACC CAGAACCTGC TCATAGAAGG CGATGTGTTC
GGCCTGTTCT GCTATGTGGG CACCCCCACC ACCGTGCGTG TGCTGCCGCT TATCGAAGAG
GCCCGCATCC CGCTGCTGGG CATGTTCACA GGAGCCAACA GACTGCGCCA TCCGTTCAGC
CGCTATGTCA TCAATGTGCG CGCCTCGTAT TATCAGGAAA CGGAAGCCGC GGTGCGGCAT
CTGGTACAGG ATCTCGGCTT TACGCGCATA GCCGTGTTCT ACCAGTACGA CGATTACGGT
TTTGACGGAC TTACGGGTAC GGAACTGGCC CTGCGTGAGC TGGGGCTTGC GCCGGTGGCA
CGCGGATCAT ACCAGCGGGG CACACTGGAT GTGAAAGAAG GACTGAACCG CATACTGGCT
GCTGATCCTC AGGCAGTTGT CATGGTGGGA ACCTACGAGC CGTGCGCCCG TTTCATCCGC
ATGGCCGCAG ATGCCGGCAT GCGCGCCGTG TTCCACACGC TTTCATTTGC CGGTGCCGAA
GAACTGGCCC GCCTGCTGCA CGGCGACCAC CGCAATCCCG TGACCATGTC ACAGGTCGTC
CCTCCCCCGT CCGCCCCGCA GACACCGGAA CTCATGGCCG ACGCACGGCA ATACACCGAA
CTCATGCGCC GCTATTATCC GCAGGACACG CCCTCCATCA TCGGGCTGGA AGGATATGTC
AACGCGCGCG TGCTGGTTGA AGCGCTGCGC CTTGCCGGAC GCGGACTGAC GCGCGAATCG
TTCATCGACG CCGTGGAATC GCTGCATGCG TTTCCGCTGG GCGGACGCAG CCGCGTAACA
TTCAGCAATA CGGACCATCA GGGCATGGAT CAGGTTTACT TCACCCTGCT GCGCAACGGT
GAGTTTGTGC TCATCAAGGA CTTTGCTCCG GTAAGGGACC TGCTGCCCCC TGCCGGCGGG
CGGCCGGCCG CATCGGCACC GGACACGGCC CGGCAGCACA ATGCCCGCGG AGCACAGTCA
TGA
|
|---|
| Protein sequence | MPAPDRRCGT YAADAAVSRC RARQRHTFRG GPVTFFPALS SVSRPHNTRV RGALSFVLTV
LLVLLPAAGC DRTRDTAQES RSRTGISDTE IRFGSSLPLT GHASYLGIQT MRGALSYIKY
INENGGIHGR RIVLDVRDDG YDPPRCLANT QNLLIEGDVF GLFCYVGTPT TVRVLPLIEE
ARIPLLGMFT GANRLRHPFS RYVINVRASY YQETEAAVRH LVQDLGFTRI AVFYQYDDYG
FDGLTGTELA LRELGLAPVA RGSYQRGTLD VKEGLNRILA ADPQAVVMVG TYEPCARFIR
MAADAGMRAV FHTLSFAGAE ELARLLHGDH RNPVTMSQVV PPPSAPQTPE LMADARQYTE
LMRRYYPQDT PSIIGLEGYV NARVLVEALR LAGRGLTRES FIDAVESLHA FPLGGRSRVT
FSNTDHQGMD QVYFTLLRNG EFVLIKDFAP VRDLLPPAGG RPAASAPDTA RQHNARGAQS
|
|---|
| |