Gene Dde_0674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0674 
Symbol 
ID3755861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp691016 
End bp691855 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content59% 
IMG OID637781538 
Productglycine/betaine/L-proline ABC transporter, permease protein 
Protein accessionYP_387170 
Protein GI78355721 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4176] ABC-type proline/glycine betaine transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000586111 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGATT ATCGCATTCC CGTTGGCGCT ACGCTTGAAA GCGTCATTGA TTTTCTGGTC 
GTGCACTGCT CCGGCGCAAC CCGTGCGTTT TCCGCGGTTA CCGATGCCGC TCTTTCCGTG
CTGGAACACG GTCTTGCCTT CATACCGTGG TGGCTGTTCA TTCCTGCCGT CGCCCTGCTG
ACCTGGCGCG GCACCGGCAG CAGAGGGCTG GGGCTTTTTG CCCTGCTGGG GCTGGGACTT
GTGTATAACA TGGGGCTGTG GCCCGCCACG GTCAGCACCA TTGCTCTGGT GCTTGTGGCC
ACGCTGCTTG CGGTGCTTAT CGGTCTGCCG CTGGGTGTTT TTGCCGCTAT CAATAAAGTG
GCATACCGTG CTATCATGCC GGTACTCGAT GTAATGCAGA CCATGCCCGC CTTTGTTTAT
CTTATTCCCG CCATTCCGTT TTTCGGGCTG GGCAAGGTTG CGGCCATTTT TTCCACTGTG
GTGTTCGCCA TGCCGCCGGT CATCAGGCTT ACCTGCCTTG GTATCCGGCA GGTTCCGGTA
GAGCTGGTGG AGTGCGCCGA AGCTTTCGGC ACCAACCGCT GGCAGCGGCT GCGCAAGCTC
GAACTGCCTC TGGCGGCGCC CACCATCATG GCGGGTGTCA ACCAGACTGT CATGCTGGCG
CTGTCCATGG TGGTCATTGC AGCCATGATC GGTGCAAAGG GTCTTGGCGG CGAAGTATGG
AAAGCCATTC AGCGCCTTGA GATGGGCCGC GGTTTTGAAG CCGGTATCGG CATTGTCATC
GTTGCCATCT GCCTTGACCG GCTGCTGCAG AAAATCGGCT CGCGCTCAGC CAGACGCTAG
 
Protein sequence
MIDYRIPVGA TLESVIDFLV VHCSGATRAF SAVTDAALSV LEHGLAFIPW WLFIPAVALL 
TWRGTGSRGL GLFALLGLGL VYNMGLWPAT VSTIALVLVA TLLAVLIGLP LGVFAAINKV
AYRAIMPVLD VMQTMPAFVY LIPAIPFFGL GKVAAIFSTV VFAMPPVIRL TCLGIRQVPV
ELVECAEAFG TNRWQRLRKL ELPLAAPTIM AGVNQTVMLA LSMVVIAAMI GAKGLGGEVW
KAIQRLEMGR GFEAGIGIVI VAICLDRLLQ KIGSRSARR