| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0668 |
|---|
| Symbol | |
|---|
| ID | 3755855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 683006 |
|---|
| End bp | 684172 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637781532 |
|---|
| Product | Bcr/CflA subfamily drug resistance transporter |
|---|
| Protein accession | YP_387164 |
|---|
| Protein GI | 78355715 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.157805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATT TCATCCTTAT ACTGCTTCTG GCGGCTTTTC CCGCCCTGTC CACAGACATG
TACCTTCCTG CCATCCCGAC GCTGTGCACG CTGTGGAACA TTCCGCTGGC TCAGGCCAAC
CTTTCTCTGG TGGTCTTTTT TGTCACGTTC AGCAGCTTTC TGCTTATCCA CGGTCCGCTT
TCCGACAGGT TCGGCAGGCG CCCCGTGCTG CTGTGGGGCA TTCTGCTGTT CATTGCGGGC
AGCCTGTTGT GCGCCGCGTC GCAGTCCATA ACCACGCTGG TGGCCGCCCG TGCGGTTCAG
GCCGTGGGGG CCGCCGCGGC ATCGGCACTC AGCTTTGCGC TGGCCAAAGA CATGTACACC
GGTGAGCAAC GCAAAAAGCT GCTGGCGTAC ATCGGTGTCA TTGTTCCGCT GTGTCCCATG
GCTGCCCCCA CCATCGGGGC GTTCATGCTG CAGCATGTTT CGTGGCGGGG CATCTTTGTG
CTGCAGGGAG CGCTTGCCCT TTTTGCCCTG TACGGGGCAT TCCGCCTGCG CGAACCGTTG
ACCAGCAAAG CAAGCGGAGG AGCGGCCGCG GCGCTTAAAC GCTATGTCAC CCTGTTCAGC
AACGCGCCTT TCATGGTGTA CGCGGTGGCC TTTGCCCTTC CCGGGCTGGC GTTTTTCGCC
TTCATCGCCG GTTCTTCAAA TATTTACATC AGCGGGTTCG GCAGTTCCGA GCAGCAATAC
GGCCTGTATT TCGCTTTCAA CGCCTTCTCA CTCATGCTCG GTTCTTTTCT CTGCTCACGG
TTATGCGTCG GGCTTGCTTC ACGCACCATA CTGTTTGTCT CGTTCGTCGG CATGCTGCTT
TCTGTGCTGG CCATGTTTGT CTTCGGAAAC GAAACCCCGG TCAGCTTTGC GGTGACCATG
TTCTGCTACA CCATGTTTCT GGGCATGAGC CGCCCCATCA GCAATCATAT GATTCTGGAA
CAGGTGGACC GCAACGCCGG CGCCGCCGCC TCGCTGGTCA CGTTCTTCTT TTTTCTGTGC
GGCGCCGTGG CCATGGAAAC CATTTCGCTG CAATGGGACT CCAAACCCTT TGTCATTGCC
GTACTGGGCG GTGCCGGCAC CGCCGCTGCA CTGGGTGTCA CACTGATGCT GCGCGGTCGC
AGTGCCGAAA AACCTGCCAC CTCCTGA
|
|---|
| Protein sequence | MPDFILILLL AAFPALSTDM YLPAIPTLCT LWNIPLAQAN LSLVVFFVTF SSFLLIHGPL
SDRFGRRPVL LWGILLFIAG SLLCAASQSI TTLVAARAVQ AVGAAAASAL SFALAKDMYT
GEQRKKLLAY IGVIVPLCPM AAPTIGAFML QHVSWRGIFV LQGALALFAL YGAFRLREPL
TSKASGGAAA ALKRYVTLFS NAPFMVYAVA FALPGLAFFA FIAGSSNIYI SGFGSSEQQY
GLYFAFNAFS LMLGSFLCSR LCVGLASRTI LFVSFVGMLL SVLAMFVFGN ETPVSFAVTM
FCYTMFLGMS RPISNHMILE QVDRNAGAAA SLVTFFFFLC GAVAMETISL QWDSKPFVIA
VLGGAGTAAA LGVTLMLRGR SAEKPATS
|
|---|
| |