| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0648 |
|---|
| Symbol | |
|---|
| ID | 3755872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 666685 |
|---|
| End bp | 668073 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637781511 |
|---|
| Product | hmc operon protein 6 |
|---|
| Protein accession | YP_387144 |
|---|
| Protein GI | 78355695 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAG GTAAGTTCTG TAATAAACGT CCGGTCAACA CCGAAGAGGA CCTGAAGGCC
CTGCTCGGCG ACAAGGGCGG CAATCAGTAT TACGAAGAAA TGAACTCGCT GGAAGTGGAC
ACCGACGCGT TGTGGTCCAC CATTGAAAAA ACCTGCCAGT CACGCATCCG CACCTGGCTG
GAAATATGCG CCCACTGCGG CATGTGCGCC GACAGCTGCT TTCTGTACCG CGTAAACAAC
CGCGACCCCA AGCAGGTTCC CGCGTACAAG ATACAGTCCA CGCTGGGCGA AATGGTAAAA
CGCAAAGGCA AGGTGGACAA CGCCTTCATG CAGCACTGCA TGGAAGTGGC GTGGTCGCAG
TGCACCTGCT GCAACCGTTG CGGCATGTAC TGCCCCCACG GCATAGACAT GGGCGTCATG
TTCAGCTACC TGCGCGGTCT CATGTACTCT CAGGGTTTTG TGCCGTGGGA ACTGAAAATC
GGTTCCGGCA TGCACCGCGT GTACAGCGCG CAGATGGACG TGACCACCGA GGACTGGGTA
GAGACCTGCG AATGGATGGA AGAGGAAACA GCCGAAGAAT GGCCGGGTCT TACCATTCCC
GTGGACAAAG TAGGCGCGGA CATCATGTAC ACGCTGAACG CCCGCGAACC CAAGCACTAC
CCTGAAGACC TTGCAGAAGC CGCCATCCTG TTCCATCTGG CCGGTGAAGA CTGGACCGTG
CCCAGCGAAG GCTGGGAACA GACGTCGCTG GCCATGTTTG CCGGTGACTG GGCCGCGTGC
AAAATGCAGG TGGACAAGGT GTATGCCGCC ATGGAACGCC TGAAACCCAA ACGCATGGTC
GGCACCGAAT GCGGCCACGC ACACCGCGCC ACCGTCATCG AAGGGCCGTA CTGGGCAGGA
CGCGAAGACG GCCTGCCGCC GGTCAAGTGC ATGCACTATG TGGAGTGGGT TGCCGAAGCT
CTGCGCGAAG GCAAGATCAA GATCGATCCT GCCAAAAAGA TCAAGGAACC CTGTACGCTT
CAGGATTCCT GCAACTATGT GCGCAACCAT GGTCTTGCCA ACTTCACCCG CGAGATCATG
AGCTATATTG CCGAAGACTA CCGTGAAATG ACCCCCAACC GCGAGCATAA CTACTGCTGC
GGCGGCGGTG GCGGCTTTAA CGGTATCGGC AAGTACCGCG CAGAGCGTAA CAAGGCCCTG
CAGACCAAGC GCGACCAGAT TCTGGCCACA GGCGCCACGC TGGTGGTGGC CCCCTGCCAT
AACTGCTGGG ACGCCATCCG CGACCTTGAA GAAGAATACG AAATCGGCAT CAAGTGGAGC
TTCCTCAAAC CGCTCCTCAT CAAGATGGCC ATTGTGCCGG ACCATCTGAA AGCCGCAGAC
GACGAATAA
|
|---|
| Protein sequence | MPEGKFCNKR PVNTEEDLKA LLGDKGGNQY YEEMNSLEVD TDALWSTIEK TCQSRIRTWL
EICAHCGMCA DSCFLYRVNN RDPKQVPAYK IQSTLGEMVK RKGKVDNAFM QHCMEVAWSQ
CTCCNRCGMY CPHGIDMGVM FSYLRGLMYS QGFVPWELKI GSGMHRVYSA QMDVTTEDWV
ETCEWMEEET AEEWPGLTIP VDKVGADIMY TLNAREPKHY PEDLAEAAIL FHLAGEDWTV
PSEGWEQTSL AMFAGDWAAC KMQVDKVYAA MERLKPKRMV GTECGHAHRA TVIEGPYWAG
REDGLPPVKC MHYVEWVAEA LREGKIKIDP AKKIKEPCTL QDSCNYVRNH GLANFTREIM
SYIAEDYREM TPNREHNYCC GGGGGFNGIG KYRAERNKAL QTKRDQILAT GATLVVAPCH
NCWDAIRDLE EEYEIGIKWS FLKPLLIKMA IVPDHLKAAD DE
|
|---|
| |