| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0644 |
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| Symbol | |
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| ID | 3755906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 662940 |
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| End bp | 664991 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637781507 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_387140 |
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| Protein GI | 78355691 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGC AAGGGGCAGA AACGGAGCAG GATCTGCGGG CGCGGGTGCC GGACGAGCGC
AGAGCCACGC TGGCCGCGCT GGAGCTGGCA GCCACCCTGA GCCATTTTGA CCAGCGGCTT
GACCGTATGG AAGGAGTGGA CAGCATTCTG CGAGAGACCG CGGCCAAGGC TCAGGGACTG
GTGGAAATGC AGTCATGGGC TTTTTTTCTG GTCGATCCGG AAACCGGAGA TTTTACCTGT
GCCCTTACTG ACGGGCCGGA AGACCGTCTG CGTTTTGAAC GTGAAGTGGA CGCACTGATA
GAAGACAGAA CCTTTGCGTG GGTTCTGGGC CGCAACAGGG CCGTGCTTGT GCCTTCGGGC
ATCGGCGCTG CCGGCAGGCT GCTGCTCCAT CCGCTGGCGA CATCTTCGGG GCTGTGGGGC
ATGTTTGTGG CTTTTACCGG TGAAGGGGCA GAGTCCACAG ACCTCGGGTT TTATCTGCTT
ACGGTGGTGT TTTTTTCCTG CGCGTCCATG CTTGAAAGCT ATTCTCTGTA CCGCCAGCTG
CAGCAGGTGA ACGAGGGACT GGAACAGCAG GTGGCCGACC GCACCCGCGA ACTGGTGTCC
ATTAACTCCA GTCTGGAACG CGAGGTGGAG GAACGCAGTC TGGCAGAGCA GCAGCTGCGG
CGGACTCTGA ACGAAAAAGA GTCATACCGG CAGCATCTTG AGGCCGTTTT TTCCAGCATA
CAGGATGCCA TCATCACCGT AGACCTGAAT GGTGTGGTAC TGAACATCAA TGCCGCTGCT
GAAAAAATGC TGGGCATTCC GGCTGCACAG GCTGTGAGAA TGCATCATAC CGCCCTGCAG
CTGCCCTGTG CCAGAGCATG TCAGGATGTG CTGGGAGCCA CGCTGGGTTC CGGTACGCCC
GTGCGCGAAT TCCGCGCCGT GAGTGAAGAC GGCGCTCAGG TGATGATTCT GGGCGGCACG
CCGCTTATCT CGCTGGACGG GACGTTTTCC GGCGCCGTTC TTTCCTGCCG CGATATCACG
CGGCTTGTGT CGCTGGAGCA GCAGCTCCGT CAGCGGCATT CATTCAGCAA TATCATCGGG
CGCAGCAAGG TTATGCAATC GCTGTTCGGC CTGCTGGAAA ATCTTGCGGC ATACGACACC
ACAGTGCTGG TCACCGGTGA ATCCGGTACC GGCAAGGAAC TGGTGGCAGA GGCTCTGCAT
TACAACGGGG CGCGCTCGGG CGGACCGCTG GTCAAGGTGA ACTGCACTGC CTTGTCTGAA
AGCCTGCTGG AAAGCGAATT GTTCGGCCAT GTGCGCGGGG CCTTTACCGG AGCCGTGCGC
GACAGGGCCG GACGGTTTGA GACCGCCGAA GGCGGTACTA TTTTTCTTGA TGAGATCGGC
GACATCTCCA TGCGTATTCA GGTACTGCTG CTGCGCTTTC TCGAGTCAAA AGAATTTGAA
CGGGTGGGTG ACACCACTCC GCGGCGGGCT GATGTGCGCA TAGTGGCTGC CACCAATGCC
GACCTGCACC GGCGCATCAG TGAAGGTACT TTCCGCGCGG ACCTGTTTTA CCGGCTCAAT
GTCACCAGTG TACATCTGCC GCCGCTCAGG GAGAGGCGCG AAGACATCCC GCTGCTGGTC
CAGCATTTTG TGGAGCAATG CAACACCGAA CTGGGAACCC GTGTGGCCGG AGTGGATGAA
AAAGCCATGG CTGCGCTGGT CCGTGCTCCG TGGCCGGGCA ATGTGCGCGA ACTGAAGCAT
ACGCTGGAAC ATGCCTGCGT GCTGTGCCGC GACGGCTATG TGGAAGCCGG TCACCTGCCG
GCGGAGCTTG CGGCGGTTGA GTCTCCCCCT GTCCGGTTTG ATGCGGCGGT GTCCGGGCCG
GTTTCTGCCG CAGCGGGCGG CGCAGTTCCG CAGCCCGTGG CGGGCGGATT CGGACGGCGG
CAGCTGGACG CCCGCAGCAT CACGGCGGCC ATCGAACAGG CCGGAGGCAA CAAGGCCAGA
GCGGCGCGCC TGCTGGGGGT AGGGCGGGCG ACTCTGTACC GCAAACTGCG GGAGCTGGAC
ATGTCCATAT AA
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| Protein sequence | MNQQGAETEQ DLRARVPDER RATLAALELA ATLSHFDQRL DRMEGVDSIL RETAAKAQGL
VEMQSWAFFL VDPETGDFTC ALTDGPEDRL RFEREVDALI EDRTFAWVLG RNRAVLVPSG
IGAAGRLLLH PLATSSGLWG MFVAFTGEGA ESTDLGFYLL TVVFFSCASM LESYSLYRQL
QQVNEGLEQQ VADRTRELVS INSSLEREVE ERSLAEQQLR RTLNEKESYR QHLEAVFSSI
QDAIITVDLN GVVLNINAAA EKMLGIPAAQ AVRMHHTALQ LPCARACQDV LGATLGSGTP
VREFRAVSED GAQVMILGGT PLISLDGTFS GAVLSCRDIT RLVSLEQQLR QRHSFSNIIG
RSKVMQSLFG LLENLAAYDT TVLVTGESGT GKELVAEALH YNGARSGGPL VKVNCTALSE
SLLESELFGH VRGAFTGAVR DRAGRFETAE GGTIFLDEIG DISMRIQVLL LRFLESKEFE
RVGDTTPRRA DVRIVAATNA DLHRRISEGT FRADLFYRLN VTSVHLPPLR ERREDIPLLV
QHFVEQCNTE LGTRVAGVDE KAMAALVRAP WPGNVRELKH TLEHACVLCR DGYVEAGHLP
AELAAVESPP VRFDAAVSGP VSAAAGGAVP QPVAGGFGRR QLDARSITAA IEQAGGNKAR
AARLLGVGRA TLYRKLRELD MSI
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