Gene Dde_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0642 
Symbol 
ID3755904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp660206 
End bp661492 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content61% 
IMG OID637781505 
ProductNADH dehydrogenase 
Protein accessionYP_387138 
Protein GI78355689 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGCA GCACAGGCAA CAGCAGAACG CGGGTCGTCG TCGCAGGCGG CGGTTTTGCG 
GGCGTTTGGG CCGTGCGCAG ACTGGCGCGC GACAAAAATC TGGATATCAT TCTGGTCGAC
AGAAACAACT ACCACACTTT TTTGCCGCTG CTCTATCAGG TTGCCGCGGC CGAACTGGAA
CCGGGGCAGA TAGCCTACCC GCTGCGGGCC ATTTTCCGCA AATATCCCAA TGTGCATTTC
GTCATAGGTG ACGTGCGCAG CATCGATATG AAAAACAAGG TGCTGCACAC TGACGGACCG
CACATTCCCT TTGACAAACT GGTTGTGGCC ATGGGCAGCT TCACGGCCTT TTACGGCGTA
CCGGGCGCGG ACAAGCACTG CTTCAGGCTG AAAAATCTGG AACAGGCCAT CACGCTGCGC
AACCATATTG TCTCATGCTT CGAACAGGCC ACACACGAAC GCAATCCGGA CAGAAAGGAC
CGTATTCTCA CATACACCGT GGTGGGCGGC GGCCCCACGG GGGTGGAATA CGCAGGAGCG
CTGGCCGAAC TTATCCGCCA GCCGCTCACC AAAGACTTTC CAACCCTGAA CACGGGACAG
GCCCGCGTGG TGCTGCTGGA AGCAGGCGAC GGTCTGCTGG CCGGATTTCC CGACCACCTG
CGCCGCTACG CATTTGAACG GCTTACCCAC ATGGGGGTGG ACGTACGCCT GAATGCCAAA
GTGACGGCCG TGACTCCGGA CAGCGTCGAG CTGGAAGGCA GCAGCCCGTT ACGGACCGAA
ACCGTGGTGT GGACAGCAGG TGTGCAGGGG CACGCTCTGG CCGGCCAGAT GGGTCTGCCC
ACGGGACGCG GCGGCCGCGT GCCGGTACTG CCCACACTGC AGGTTGAAGG ACATCCTGAT
GTTTTCGTTG CGGGCGACAT GGCTCTGCCG CAGGGCGATT CGCCCGCTCC GCTCATTGCT
CCCAATGCCA TACAGCAGGG CGCTCTGGCC GCGGACAACA TACGCGCCGC ACTGGCAGGC
AGACCGCTGC GCGCTTTCCG GTACCGCGAC AAAGGCTCCA TGGCCACCAT AGGGCGGGCC
GCCGCCGTGG TACGCATGGG CAAAGAACAC ACAGCCACCG GCTTTGTTGC CTGGGTCATG
TGGCTGTTCA TTCACCTGCT GTATCTTGTG GGCTTCCGCA ACAGGCTGTT TGTACTTTTC
ACGTGGGCTT GGGATTATAT CTTTTTCGAA CGGGCAGCGC GCATCATCAT TCCCCGCGGC
CCCATAGAAG ACGACGACGC GCCCTGA
 
Protein sequence
MTGSTGNSRT RVVVAGGGFA GVWAVRRLAR DKNLDIILVD RNNYHTFLPL LYQVAAAELE 
PGQIAYPLRA IFRKYPNVHF VIGDVRSIDM KNKVLHTDGP HIPFDKLVVA MGSFTAFYGV
PGADKHCFRL KNLEQAITLR NHIVSCFEQA THERNPDRKD RILTYTVVGG GPTGVEYAGA
LAELIRQPLT KDFPTLNTGQ ARVVLLEAGD GLLAGFPDHL RRYAFERLTH MGVDVRLNAK
VTAVTPDSVE LEGSSPLRTE TVVWTAGVQG HALAGQMGLP TGRGGRVPVL PTLQVEGHPD
VFVAGDMALP QGDSPAPLIA PNAIQQGALA ADNIRAALAG RPLRAFRYRD KGSMATIGRA
AAVVRMGKEH TATGFVAWVM WLFIHLLYLV GFRNRLFVLF TWAWDYIFFE RAARIIIPRG
PIEDDDAP