| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0571 |
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| Symbol | |
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| ID | 3756480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 595140 |
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| End bp | 597092 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637781432 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_387067 |
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| Protein GI | 78355618 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGGG GTATTTATGA GGATCAGAGA TTGGCACGTA AGCACACTCT GCAACGGTGG
AGCGCCGAAG ACTCCGCCGA ACTCTATGGC ATCCGCAACT GGGGTGCCGG GTACTTCGAT
GTTTCCGCCG AAGGCGACGT CGTGGTGTAT CCTTTCGGGA GGTCGCATAA GCTGAACGTC
AGCGTTCCGG ACATCATCCG GGGCATGAAG GAGCGCGGGC TTGATATGCC TGTGCTGCTT
CGCATCGAGA ACATTCTCGA ATCACGCATC TCCCTTCTTC ACAAATCATT CCGCAACGCC
ATCGAATCGC TCGGTTATCA GGGCGGCTAC CGGGGCGTTT TTCCCATCAA GGTCAATCAG
CAGCAGCAGG TTATCGAAAA GATAGCCACA TACGGCTCCA TGTACCATCA CGGTCTGGAG
GTCGGTTCCA AGGCGGAGCT TATCGCCGCC ATCTCGCAGG CGCAGGATAA AGAAGCGTGC
ATTGTCTGCA ACGGGTACAA GGACGAGGAG TTCATTGACC TGGGGCTGCA TGCCGTCCGC
ATGGGGTTCA AGTGCTTTTT TGTGCTTGAA ATGCCGCGTG AGCTTGAGCT TATTCTGCGG
CGTTCGCAGC AGATGGGTGT GCGTCCGCTT ATCGGCACCC GTGTCAAGCT TGCCAGCAAG
GCGGGCGGTC ACTGGAGCGA TTCCGGCGGC GAGCTGTCCA CTTTCGGCCT GACCACGGCG
CAGATAATGG ACGTGGTGGA CCGGCTGCAG AAAGAGGACA TGCTCGACTG CTTCCGCCTG
CTGCATTACC ACCTCGGTTC GCAGGTGCCC AATATCCGCG ATATCCGCAG TGCCGTAATG
GAAGCCACCC GCGTTTATGC AGGTCTGGTG TCCGAAGGTG CCGCCATGGG CTATCTTGAC
CTGGGCGGCG GCCTTGCCGT GGATTACGAC GGGTCGCATA CCAATTTCGT TTCCAGCCGC
AACTACACGC AGGACGAGTA CTGCACGGAC ATTGTGGAAG CCGTCATGAG CATTCTGGAC
GAAACAGGTG TGCCGCATCC GCATATCATC ACGGAATCCG GCCGGGCCAC CGTGGCGTAT
TATTCCATGC TGCTTTTTAA CATCCTTGAT GTGAGCGGCG CCGAAGCCTT TCCCGACAAT
CTGCCGGATA CACTGGATGA AAGTGAACCG GAAATGATCC GCAACCTGTT CGAGGCGTTC
AGAGGGCTTA CGCTGCGCAA CCTGCAGGAA TGCTATAACG ACGCGTTGTA CTACCGCGAC
GAAATCCGCC GTAATTTTCT GGACGGACGG GTGACGCTGC GTCAGCGCAC GCTGGGCGAG
CGGATTTTCT GGGCACTCAT GCGGCGTGTG GCGGAGGAAA AAGATAAACT CCGTCATGTG
CCCAAAGAAC TTGCCGAGAT AGACCGTGTA CTGGCCGATG TCTATTACGG CAACTTCAGT
GTGTTCCAGT CGCTGCCCGA CTCTTGGGCC ATCGAACAGC TGTTTCCTGT CATGCCGGTT
CACAGGCTCA GGGAATTTCC CGACCGTCCG GCCATTCTTT CGGACATCAC CTGTGACAGT
GACGGACGCA TAGACCGCTT CATCGATCCG CAAGGGGTGC GCAATACCAT TGACCTGCAT
TCCCTTAACG GCGAGGAGTA TTATCTGGGC GTCTTTCTGG TGGGCGCGTA TCAGGAAACG
CTGGGCGACC TGCACAACCT GCTGGGCGAC ACCAACGTGG TCAGCATCCG CGTGGAAGAG
GACGGCAGCA TTGAATACCG GCGTGAACTG CTTGGTGATT CCGTGGCCGA TGTGCTTTCC
AGCGTGGAAT ACGACCCGAG GCGCATCATG GAACAGCTGC GCGACACGGC GGAACAGGCA
GTGCGCGAGG GGCGCATCAC CCCTTCCGAA AGGTACGGCA TTTTGCAGGC CTACGAAAAC
GGTCTGCGCG GATACACCTA TTTCGAACGA TAG
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| Protein sequence | MKRGIYEDQR LARKHTLQRW SAEDSAELYG IRNWGAGYFD VSAEGDVVVY PFGRSHKLNV
SVPDIIRGMK ERGLDMPVLL RIENILESRI SLLHKSFRNA IESLGYQGGY RGVFPIKVNQ
QQQVIEKIAT YGSMYHHGLE VGSKAELIAA ISQAQDKEAC IVCNGYKDEE FIDLGLHAVR
MGFKCFFVLE MPRELELILR RSQQMGVRPL IGTRVKLASK AGGHWSDSGG ELSTFGLTTA
QIMDVVDRLQ KEDMLDCFRL LHYHLGSQVP NIRDIRSAVM EATRVYAGLV SEGAAMGYLD
LGGGLAVDYD GSHTNFVSSR NYTQDEYCTD IVEAVMSILD ETGVPHPHII TESGRATVAY
YSMLLFNILD VSGAEAFPDN LPDTLDESEP EMIRNLFEAF RGLTLRNLQE CYNDALYYRD
EIRRNFLDGR VTLRQRTLGE RIFWALMRRV AEEKDKLRHV PKELAEIDRV LADVYYGNFS
VFQSLPDSWA IEQLFPVMPV HRLREFPDRP AILSDITCDS DGRIDRFIDP QGVRNTIDLH
SLNGEEYYLG VFLVGAYQET LGDLHNLLGD TNVVSIRVEE DGSIEYRREL LGDSVADVLS
SVEYDPRRIM EQLRDTAEQA VREGRITPSE RYGILQAYEN GLRGYTYFER
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