Gene Dde_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0569 
Symbol 
ID3756478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp593649 
End bp594860 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content54% 
IMG OID637781430 
Productdiguanylate cyclase 
Protein accessionYP_387065 
Protein GI78355616 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAACCG GTCTGCGCTC AATTCAACTT ATCGGAATTT ACCCTTGCGG GCGCCTCTAT 
TTCACACGCC CGGCATATAC GGAATGCGTC TTGAAGCAAC ATCTGCGTAT AAAACTGCAT
CAGACACTGC ACAGCGGAAC AGAGAAAGAC AGTGATCCTG AATTAGTCCG CCGCACTTAT
ATGCTGAACG GCTTTCTGCT GCTCAGTGCC TTTATATGTG CACTGATGGC AGTACTGAAA
CATACCGAAA GCTTTACGGT GCTTAAAGGC ATTTTATGGT GTTCTGCAGG GGCATACTGT
GTGTTATACT TTTTTTTGCG CACAAGCGGT ATGCTTAAAG TGGCAAGCGA CTTTGCGCTG
GCTCTTACCG TCACACTCGG CGTACTGCTT ATCTGGCGTC TGAATGACCA GATAGCATAT
ATCCTCTGGC TTTTCGCACT GCCGCCTGCA GCGTTTTTCA CCTTCGGTAC AAAGCGTGCA
GCTGTGGCGC TGGGGCTCCT CCTTATTGCG CTGCTGCTCA GCCCTTTTGT TTCTCCCGCA
GCCATGCCGC CGGAAACGTT TTCGCTGTCT TACTTTGTGC GCGTAATTGC CGCTTTCTTT
ACTCTGAGCC TGTTTTCCGC ACTGGGTGAA TATTCACGCG CACACACGCA ACGGACACTG
GTGGCCCTTA CCAGAGAAAT GGAACAATGC GCGTGCACCG ACCCGCTGAC AGGTCTGCTC
AACCGGCGGG GCATATACGA CAGACTTAAC GAAGAACGGG CGCGGGCCAC ACGGTCGGGT
TCCACATTTT CGGTGATACT GTGCGACGTG GACCACTTCA AGAACGTCAA CGACTGTTTC
GGCCATCAGT GCGGCGACCA TGTGCTGCAC CAGCTTGCCG AGCACTTCCG CCGCAGCGTG
CGCGGGCAGG ATGTCGTCTG CCGCTGGGGA GGCGAGGAAT TCCTCTTCAT TCTGCCGGAA
ACCGACGAGC AGGGAGCCTT GAATCTGGCG GAGAAACTAC GCTCCACCGT GGAACAGACG
CCCGTCAATT ACCACGGCAT GCCCATAGAC ATCACACTGA GTCTGGGCGT GCAGGAATGC
ACCCTGACGG AAAGCACCGA ATTCCACATC CGCGTCGCGG ACCAGAAGCT TTACATAGCC
AAGGAACACG GCCGCAACAA AGTGGTCAGC GGCAACATAG AGGAACTGAT GCCGCAGGAA
CTCATAGCCT GA
 
Protein sequence
MLTGLRSIQL IGIYPCGRLY FTRPAYTECV LKQHLRIKLH QTLHSGTEKD SDPELVRRTY 
MLNGFLLLSA FICALMAVLK HTESFTVLKG ILWCSAGAYC VLYFFLRTSG MLKVASDFAL
ALTVTLGVLL IWRLNDQIAY ILWLFALPPA AFFTFGTKRA AVALGLLLIA LLLSPFVSPA
AMPPETFSLS YFVRVIAAFF TLSLFSALGE YSRAHTQRTL VALTREMEQC ACTDPLTGLL
NRRGIYDRLN EERARATRSG STFSVILCDV DHFKNVNDCF GHQCGDHVLH QLAEHFRRSV
RGQDVVCRWG GEEFLFILPE TDEQGALNLA EKLRSTVEQT PVNYHGMPID ITLSLGVQEC
TLTESTEFHI RVADQKLYIA KEHGRNKVVS GNIEELMPQE LIA