Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0569 |
Symbol | |
ID | 3756478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 593649 |
End bp | 594860 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637781430 |
Product | diguanylate cyclase |
Protein accession | YP_387065 |
Protein GI | 78355616 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTAACCG GTCTGCGCTC AATTCAACTT ATCGGAATTT ACCCTTGCGG GCGCCTCTAT TTCACACGCC CGGCATATAC GGAATGCGTC TTGAAGCAAC ATCTGCGTAT AAAACTGCAT CAGACACTGC ACAGCGGAAC AGAGAAAGAC AGTGATCCTG AATTAGTCCG CCGCACTTAT ATGCTGAACG GCTTTCTGCT GCTCAGTGCC TTTATATGTG CACTGATGGC AGTACTGAAA CATACCGAAA GCTTTACGGT GCTTAAAGGC ATTTTATGGT GTTCTGCAGG GGCATACTGT GTGTTATACT TTTTTTTGCG CACAAGCGGT ATGCTTAAAG TGGCAAGCGA CTTTGCGCTG GCTCTTACCG TCACACTCGG CGTACTGCTT ATCTGGCGTC TGAATGACCA GATAGCATAT ATCCTCTGGC TTTTCGCACT GCCGCCTGCA GCGTTTTTCA CCTTCGGTAC AAAGCGTGCA GCTGTGGCGC TGGGGCTCCT CCTTATTGCG CTGCTGCTCA GCCCTTTTGT TTCTCCCGCA GCCATGCCGC CGGAAACGTT TTCGCTGTCT TACTTTGTGC GCGTAATTGC CGCTTTCTTT ACTCTGAGCC TGTTTTCCGC ACTGGGTGAA TATTCACGCG CACACACGCA ACGGACACTG GTGGCCCTTA CCAGAGAAAT GGAACAATGC GCGTGCACCG ACCCGCTGAC AGGTCTGCTC AACCGGCGGG GCATATACGA CAGACTTAAC GAAGAACGGG CGCGGGCCAC ACGGTCGGGT TCCACATTTT CGGTGATACT GTGCGACGTG GACCACTTCA AGAACGTCAA CGACTGTTTC GGCCATCAGT GCGGCGACCA TGTGCTGCAC CAGCTTGCCG AGCACTTCCG CCGCAGCGTG CGCGGGCAGG ATGTCGTCTG CCGCTGGGGA GGCGAGGAAT TCCTCTTCAT TCTGCCGGAA ACCGACGAGC AGGGAGCCTT GAATCTGGCG GAGAAACTAC GCTCCACCGT GGAACAGACG CCCGTCAATT ACCACGGCAT GCCCATAGAC ATCACACTGA GTCTGGGCGT GCAGGAATGC ACCCTGACGG AAAGCACCGA ATTCCACATC CGCGTCGCGG ACCAGAAGCT TTACATAGCC AAGGAACACG GCCGCAACAA AGTGGTCAGC GGCAACATAG AGGAACTGAT GCCGCAGGAA CTCATAGCCT GA
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Protein sequence | MLTGLRSIQL IGIYPCGRLY FTRPAYTECV LKQHLRIKLH QTLHSGTEKD SDPELVRRTY MLNGFLLLSA FICALMAVLK HTESFTVLKG ILWCSAGAYC VLYFFLRTSG MLKVASDFAL ALTVTLGVLL IWRLNDQIAY ILWLFALPPA AFFTFGTKRA AVALGLLLIA LLLSPFVSPA AMPPETFSLS YFVRVIAAFF TLSLFSALGE YSRAHTQRTL VALTREMEQC ACTDPLTGLL NRRGIYDRLN EERARATRSG STFSVILCDV DHFKNVNDCF GHQCGDHVLH QLAEHFRRSV RGQDVVCRWG GEEFLFILPE TDEQGALNLA EKLRSTVEQT PVNYHGMPID ITLSLGVQEC TLTESTEFHI RVADQKLYIA KEHGRNKVVS GNIEELMPQE LIA
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