Gene Dde_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0561 
Symbol 
ID3756470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp584937 
End bp586616 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content61% 
IMG OID637781422 
Productcytochrome c family protein 
Protein accessionYP_387057 
Protein GI78355608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.102352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGCA GATACGGGCT TTGCGTCAGG GGAGGTCTGT GCCGTGCGGC GGTGCGGGCG 
CTGCTGCTGG TGGCAGTGCT GTGCGTAACG CCGGTGCTGG CGGCGGACGG CAAGACGCTG
TACGGGCAGC ATTGCGGCGT GTGCCATTCC GTGGGCGGCG AAAATGATAT CATGCCGCTC
ACCGCGCATT ATCCGCTTAT CGGCATGGAT GCCAAAATTT CAGGCTTCGG GCGGTTATCC
GCGGCCATGC CGCCTTTTTC CGGTACGGTT GAAGAGCGCA TGCTGGTGGC GGCGTATATT
GTCAATGAAC TGCATGGCGG CGCGGTGGAA AACATTCCTG TGAAGCCTGC GGAACTGACG
CTGGAAATAC CCCCGTTCAA TCCGGACAAG GACGAATATG TTCTGCTGGC CTGGAACAAT
CTGGGCATGC ACTGCATTTC GGACAGCTAT TCCGAATGGG TGCTGCTGCC GCCCGCCAAT
GACATATGGG CGCAGCTCAT CAGGCGCGGC GAACGCCCTT CGGTGGTCAC GCAGGGCGTG
ATTCTGAGTT ACTCCGTCGA GGCCGGATTT GAAAAACCGG CGGAAAGGTC GACTTTCTGG
CAGTATGCCG AAAGTCTTTT CGGGGTGCGG CCGCCGGATA ACGTGGGGCT TTCGGGCAAC
GGCATGCAGG GAGTCATGAA GTTGCATGCG GACCTGAAAA GTTTTGAGGC CGCACTGATT
CCTGTGGAAC CCTATCCGGC GCAGGGCGGC TACAACCCGT ATCCGGTGTT CACCGTGCAG
GCGCGTGACG TCGCCACAGG CAGACTGCTG GCGGAAACAA AGACCGTGGC CCCCACCTCC
ACGGAAATGG GCTGCCGCAA CTGCCACGGC GGTCCGTGGA AGCATGAAAG CATCGCGGGC
ATATCGCAGG AGACCGGCCG CAATGTGCTG AAGGCGCATG ACCGGCTGAG CGGCAGTGAA
CTGGCGGCGC TGGCTGACAA GGGAAAACCG CAGCTGTGTC AGATCTGCCA TCCCGACCCG
GTGCTCAATG CCAAAGGCGA CCCCGCACTG CTCAATCTGC CTGCGGCCAT ACATGGTTTT
CATGCCAATT ATCTCACGGG CCGCGGGTCT GAAGCCTGTG CCTACTGCCA TCCCAACAAT
CCGCAGGGGC CCACGCGTTG TCTGCGCGGG GTGCACGCCA CAGCCGGTAT AGGCTGCGTG
AAATGTCACG GCTATATGGA AGACCACGCC ATATCGCTGC TTAAAAAAGA GCAGGAAGCA
GGCAAGGCCG GTGCGGCGCG GCTGATGGAG CATTACGGTC CCCGTATGGT GGCCGGTACG
GCCGATGTGG CGGCCCGCAC GCCGTGGCTG CAGGAACCAG ACTGCGCCAC CTGCCATAAA
GATTACCGCA ACAGACCCGT GGCTGAGCAG GCCAATGCAT TCAATGTGTG GACTGCCGGC
GGTGCGGAGC TGTACAGAAA CAGGCCGGAC GCCATGGGCG CTGTGATGTG CATTGCCTGC
CATAACAGTC CGCATGCGTC ATATCCCGCT GTCAACGCTT ACGGACGCGA CAGGGATAAC
ATAGGCCCCA TGCAGTACCA GAACGCACCC GGCCCCGTGG GGGCGGGCGG TAACTGCGCC
GTGTGTCACA CCAGAATGAT GCAGACCGAC GCGCATCATA TGGGCCGGAC TGACGGCTAG
 
Protein sequence
MDSRYGLCVR GGLCRAAVRA LLLVAVLCVT PVLAADGKTL YGQHCGVCHS VGGENDIMPL 
TAHYPLIGMD AKISGFGRLS AAMPPFSGTV EERMLVAAYI VNELHGGAVE NIPVKPAELT
LEIPPFNPDK DEYVLLAWNN LGMHCISDSY SEWVLLPPAN DIWAQLIRRG ERPSVVTQGV
ILSYSVEAGF EKPAERSTFW QYAESLFGVR PPDNVGLSGN GMQGVMKLHA DLKSFEAALI
PVEPYPAQGG YNPYPVFTVQ ARDVATGRLL AETKTVAPTS TEMGCRNCHG GPWKHESIAG
ISQETGRNVL KAHDRLSGSE LAALADKGKP QLCQICHPDP VLNAKGDPAL LNLPAAIHGF
HANYLTGRGS EACAYCHPNN PQGPTRCLRG VHATAGIGCV KCHGYMEDHA ISLLKKEQEA
GKAGAARLME HYGPRMVAGT ADVAARTPWL QEPDCATCHK DYRNRPVAEQ ANAFNVWTAG
GAELYRNRPD AMGAVMCIAC HNSPHASYPA VNAYGRDRDN IGPMQYQNAP GPVGAGGNCA
VCHTRMMQTD AHHMGRTDG