Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0553 |
Symbol | |
ID | 3756462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 572745 |
End bp | 574214 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637781414 |
Product | putative transcriptional regulator |
Protein accession | YP_387049 |
Protein GI | 78355600 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATTC CCAAAACAGC TTATGCAGTC ATCGCCGCCA CTCTGTGCAT CGTGCTGCTG TTCATTGTGT TCAACACCGC CATTGTCGCA CGACTGGTAA GCGGCGTGGC AGTAGACTAC TTTGTCGATG CCGCGCGGCA GTCGCTGCGC GACACACGCA CCCAGATGAC GGCCATGCTG TCCGACAGCA CCCCGCTGGA CGACAACGCC GAGTCTGAAA TCCTGCGCGA AATGCTGCGG GTCAGCGGTG CCACCGGCAT TGTGGTCTTC AACACTGACG GCAGCGGAGT GTATCTGGAT ACGCTTACCG GCAGAAAAGC CCGCGTACCC GCACCGCTGG CTCCGCAGTC CGGCACGGCG GAACAGACTG AAAACACCGC CCCCGCACAA TCACGGCCCG GTGCCATAGC CGGCAACAGC ACCGGACAAC CGGCCGCGGA ATCGCTCAGC CCGGCTCTTG CCCGATGGCT GCGTGCCGGT TTGGACACAT CGCTGGAGGT TGCCCCCGGC CTGCCCCTGC TGGAAATATC GCCGGAAACG GACGGCGGGC GTCTGCTGTA CATTCTGGCG CAGGCCGCCG GAAGGACAGC TTTTCTGCTG TACACGCCGG AAGCGCTCAT CGGCAGTGTG GTGCAGCATT TTCCGCATGC CGAAGCCGTG GTATCTGTCA ACGGAATCAT TCTGGCAGCC AGCGGCGGTT TCAGTCAGGA ACTGGAAAAA GCCCGGCAGG AAGAAAAGCA GCTCACGCTC AAGGCACTGA CAGGACGACG CGAAGGCACC TACGGCATCA CTTCCGAAAC GCTTGTCTCC TCCAAAGCCA CAGGCCTTGC CGTGACCATG CTGGCACGGG AGGTCAACCT GCTTTCCATG CTGCTGCGCG ACACGCGGTT TCTGGTGGCC ACAGCCGCCC TGCTGGCCGC GCTGGCGGCC ATCATCATCG GCTACACGTT GTATGCGGGC AAAATGCGCA AGGCGTACAG GCCCAACAAA CCGCTGTCAT CCCAGCAGGT ACGGCGCCTG CTGCGGCAGG GCGAAGGCGA CCATGTGGAG TTCAAATCAA CGCTGCGCTT TAACCTGAAA AGCGGTAAAA ATGATAAAAG TATAGAGCTT GCCGTTCTGA AAGGCATCAC CGCATTTCTG AACACAGCCG GAGGCACCCT GCTGGTAGGC GTGAGCGACG AAGGCGAGGT GCTGGGCATG GACCCGGACG GCTTCCGCAA CGACGACCAT GCCCTGCGAC ATATCAGCAA TCTGGTGGCG GAACATATCG GCATACGGCA TATCAACGCC ATAAGCCTGC ATGCACTGAC GCTGGACGGC AAAACCGTAC TGGCTGCGGT GTGCCGCCAG GCCACCGACC CCGCCTTTCT GCGTCACAAA GACGACGAGA TGTTTCTTGT ACGGCAGGGA CCGGGCAACA GACAGCTGAG TTTCAGCGAG TTCTGGCACA TCAGCCGCAA GTTCCGCTGA
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Protein sequence | MRIPKTAYAV IAATLCIVLL FIVFNTAIVA RLVSGVAVDY FVDAARQSLR DTRTQMTAML SDSTPLDDNA ESEILREMLR VSGATGIVVF NTDGSGVYLD TLTGRKARVP APLAPQSGTA EQTENTAPAQ SRPGAIAGNS TGQPAAESLS PALARWLRAG LDTSLEVAPG LPLLEISPET DGGRLLYILA QAAGRTAFLL YTPEALIGSV VQHFPHAEAV VSVNGIILAA SGGFSQELEK ARQEEKQLTL KALTGRREGT YGITSETLVS SKATGLAVTM LAREVNLLSM LLRDTRFLVA TAALLAALAA IIIGYTLYAG KMRKAYRPNK PLSSQQVRRL LRQGEGDHVE FKSTLRFNLK SGKNDKSIEL AVLKGITAFL NTAGGTLLVG VSDEGEVLGM DPDGFRNDDH ALRHISNLVA EHIGIRHINA ISLHALTLDG KTVLAAVCRQ ATDPAFLRHK DDEMFLVRQG PGNRQLSFSE FWHISRKFR
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