| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0549 |
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| Symbol | |
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| ID | 3756496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 567933 |
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| End bp | 569156 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637781410 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_387045 |
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| Protein GI | 78355596 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACCA GAACGCTTCT GACAGCCGCT GCAGGCATCG CAGTACTGGC GGTTATTTTC
ATGTGGTCTG CCAATATGCT GAATACACAA CGCATCAGCC CGGAAGACAC ATTTTCATCC
CCCCGTCTGC CTGCGGGCAA CATTACAGTA AACACGATTA CGGCTGCTGC CGTGCCCGTG
ACAGATACGG CGGAAGCCAC CGGCACAGTG CGTCCGCGCA CCGAGACCCG CGTGGAAGCG
CAGGTCACCG CAAAAATTCT GCGTATGGCC GTTACCACCG GCGATGTGGT AAAAAAAGGA
GACGTACTGG TAGAGCTGGA TGCCCGAGAG CTTGTATCGC GGCGGGATCA GGCGGGGCAG
GCGCTGATAA GCAGCAGGGC AGCACTGGGG CAGGCGCGCC AGTCCGTGGC CGAAGCCAGA
GCCGCCTTTG ATAAAACCCG CAACCAGTAC AGACGCATCA AGGCGCTGTT TTCCGAAAGA
GCTGTTGCCC AGCGCGAACT TGATCAGGCG GAAGCGGATT ATCTGCAGGC GGAAGCTGCT
CTGGGCAGTG CGCGCGGAGG TCTGAGCGGG GCGGAATCTG CCGTGCAGCA GGCGCAGAAA
AGACTGGAAG AAGCTGAAAT AGCTCTTGGT TATGCCACCA TCACCGCGCT GGAGGACGGC
GAGATAGTCC GGCGTGAGGC CGAAGCCGGC GATCTGGCTT TTCCCGGCAA ACCTCTGCTG
GTGGTACAGG CAGGCGGAGC ACTGCGGCTG GAAGCACAGG TCCGTGAAGG ACTTATAGGA
CGCGTGCGCC CCGGAGTGCG TCTGCAGGTG AACATTTCTG CGCTGGGCAC AGACACGCTG
GACGGCGTGG TGGAAGAGGT GGTGCCCTCG GCAGACCCGC GCACACGAAC CTTTCTGGTC
AAGGTGGGGC TGCCGCCCGC CCCCGGACTG TACCCCGGCA TGTACGGCAC GCTGCTCATT
CCGCTTGATG CGCAGACTGC CGTTCTTGTG CCTGCTGCGG CGGTGCACCG TGTGGGGCAG
CTCGAAACAG TGAGCATCCT GTCAGATGAA GGCATCCCGC ACACCGTGCA TGTGAAAACG
GGCAGACATT TCGGCCAGCA GGTGGAAATA CTCTCGGGTC TTTCAGGCGG CGAGACTCTT
GTGCTGCCCG CAGGCGGGGC ACAGACCCCA CCGGAACGCA CACCGCAGGA AGCAGCCGCA
GGAGACAGCC ATGCCGCAGC ATGA
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| Protein sequence | MRTRTLLTAA AGIAVLAVIF MWSANMLNTQ RISPEDTFSS PRLPAGNITV NTITAAAVPV
TDTAEATGTV RPRTETRVEA QVTAKILRMA VTTGDVVKKG DVLVELDARE LVSRRDQAGQ
ALISSRAALG QARQSVAEAR AAFDKTRNQY RRIKALFSER AVAQRELDQA EADYLQAEAA
LGSARGGLSG AESAVQQAQK RLEEAEIALG YATITALEDG EIVRREAEAG DLAFPGKPLL
VVQAGGALRL EAQVREGLIG RVRPGVRLQV NISALGTDTL DGVVEEVVPS ADPRTRTFLV
KVGLPPAPGL YPGMYGTLLI PLDAQTAVLV PAAAVHRVGQ LETVSILSDE GIPHTVHVKT
GRHFGQQVEI LSGLSGGETL VLPAGGAQTP PERTPQEAAA GDSHAAA
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