Gene Dde_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0546 
Symbol 
ID3756493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp560473 
End bp561723 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content60% 
IMG OID637781407 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_387042 
Protein GI78355593 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.469364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAC TGGTTATCAA AGGTGGCGTG CCGCTGGAAG GCACCATACG GGTCAGCGGT 
TCGAAAAACG CCTCTTTGCC AATCCTCATG GCCTCCATCC TGCTGGATGA GCCTGTGATT
TACCGCAATG TACCGCGTCT GCGCGATATT CATACCACCA ACAAACTGCT GGGCATTCTT
GGTTGTCCTG CCGAGTTTCA GGGCGATGCA GTGCATGTCA GGCCCTGCGA TCTGAATCCT
GAGGCGCCTT ACGAACTGGT GAAGACCATG CGCGCTTCCG TGCTATGTCT GGGTCCGCTG
CTGGCGCGGC TGGGCGAAGC GCGGGTGGCA TATCCGGGCG GCTGCGCCAT AGGAGCCCGT
CCGGTGGACC TGCACCTGAG CGCGCTGGAA AAAATGGGTG CGGAATTCGA GCTTGATTCC
GGTTATATAG TGGGCCGCTG CCGTCAGTTG CAGGGGGCGC ATATCCGGTT TGACTTTCCC
ACCGTTGGCG GTACCGAAAA CCTGCTGATG GCCGCCACGC TGGCCAAAGG CGAAACCATA
CTGGAAAATG CGGCACGCGA GCCGGAGGTC ATCGATCTGG CCGACTTCCT GTGCGCCTGC
GGAGCGGATA TTACAGGGCA GGGCACAGAT GTCATACGCA TACGGGGTGT GGAACGCCTG
CATGGTTGCG AATACCGCAT CATGCCTGAC CGCATCGAGG CGGGAACCTT TATGGTGGCG
GCGGGCATAA CCCGCGGCAA CCTGCTTATC GAAGATTGTC CGGATGACGC GCTGGATGCC
GTCAGCCAGA AACTGCGTGA TATGGGACTG CATGTTTCGC GCGAAGAAGG CGGAACCCGC
GTACGCTATC AGGGCCACCT TGAGTCCACC GATATCGTTA CGCATCCGTA TCCGGGATTT
CCCACCGACA TGCAGGCGCA GTTCATGGCG CTCATGTGCG TGGCAGACGG GTTCGGCATG
GTGGAGGAAA CCATTTTTGA AAACCGGTTC ATGCATGTGC TCGAGCTGGT ACGCATGGGA
GCCGATGTGC GTCTTGTGGG GCGGACAGCC CGCGTGCGCG GCGGCCGTCA GCTGCGGGGG
GCGCCGGTCA TGGCCTCCGA CCTGCGGGCT TCTGCTTCTC TGGTTCTGGC GGGGCTGGCC
GCGCAGGGCG AAACCCATGT ACAGCGTATC TACCATCTGG ACAGAGGCTA CGAGAGCATC
GAGGAAAAAC TCTGCCCTGT GGGCGCGGAT ATCAGGCGCG TGCCTGAATA G
 
Protein sequence
MDKLVIKGGV PLEGTIRVSG SKNASLPILM ASILLDEPVI YRNVPRLRDI HTTNKLLGIL 
GCPAEFQGDA VHVRPCDLNP EAPYELVKTM RASVLCLGPL LARLGEARVA YPGGCAIGAR
PVDLHLSALE KMGAEFELDS GYIVGRCRQL QGAHIRFDFP TVGGTENLLM AATLAKGETI
LENAAREPEV IDLADFLCAC GADITGQGTD VIRIRGVERL HGCEYRIMPD RIEAGTFMVA
AGITRGNLLI EDCPDDALDA VSQKLRDMGL HVSREEGGTR VRYQGHLEST DIVTHPYPGF
PTDMQAQFMA LMCVADGFGM VEETIFENRF MHVLELVRMG ADVRLVGRTA RVRGGRQLRG
APVMASDLRA SASLVLAGLA AQGETHVQRI YHLDRGYESI EEKLCPVGAD IRRVPE