| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0542 |
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| Symbol | |
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| ID | 3756488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 554443 |
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| End bp | 555330 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637781402 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_387038 |
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| Protein GI | 78355589 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0765398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAC TGCCAGAAGT GGAAACCATC GCCCGCGGGC TTGCCCCCGA ACTTACCGGG
CGCAGAATAA CGGAAGTTGA AGTGTTCAAT GCCGGAAGCG TGCAGGGAGA CAGAGAAGTC
TTTGACGCCT GCACGCCCGG ACGCGTCATT GCCGGTGTGG GCCGCAGAGG CAAACTGCTG
CTGGTGCATC TGGAAAAAGA GCGGCGGCAG GGTGCCGCCT GCAGAGCGGT GCTGGACCAC
AGACCCGCCG GTGATACGCC GGATATGCTG GCGTTTCATC TGCGCATGAG CGGCAGACTT
TTCATCTACG GACCGGAGCA GCTTCCCGGT CCGCATACAC GCATAATCAT CACGCTTGAT
TCGGGACGCA GGCTGTTTTT TGACGATGCG CGCAAGTTCG GTTCGTGCCG TGCGCTTTCG
CCCTTCAGCA GGCCGCTGTG GCGGTTCTGG GCCACACTGG GGCCGGAACC GCTGGACGTG
GACCGTGAGA CATTCATTGA GCAGTTCGCA GAACGGCGCA AAGCCGTGAA AGCCCTGTTG
CTGGATCAGA CAGTGATAGC AGGGGTGGGC AACATCTATG CGGACGAGTC GCTTTTCAGG
GCCGGAATCA GACCGGATGC CCGGCCGGGC GACTGGACGC GCGACGAAGC TGAACGCCGT
CTGGGCAGGC TGTATGATGA ACTGCGCGAA GTGCTGCGCG AGGCCATCAG CGAATGCGGT
TCGTCCATAC GCGATTACCG TGATGCCAGA GGCGATGCCG GAGCTTTTCA GAACTGTTTC
AGGGTTTACG GGCGCAGCGG AATGCAGTGC GTCAGCTGCA GAGATGCACT GACCACGGCC
AGAGTGGCCG GGCGCACCAC GGTGTACTGC AGCAACTGCC AGAAATAA
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| Protein sequence | MPELPEVETI ARGLAPELTG RRITEVEVFN AGSVQGDREV FDACTPGRVI AGVGRRGKLL
LVHLEKERRQ GAACRAVLDH RPAGDTPDML AFHLRMSGRL FIYGPEQLPG PHTRIIITLD
SGRRLFFDDA RKFGSCRALS PFSRPLWRFW ATLGPEPLDV DRETFIEQFA ERRKAVKALL
LDQTVIAGVG NIYADESLFR AGIRPDARPG DWTRDEAERR LGRLYDELRE VLREAISECG
SSIRDYRDAR GDAGAFQNCF RVYGRSGMQC VSCRDALTTA RVAGRTTVYC SNCQK
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