Gene Dde_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0541 
Symbol 
ID3756487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp552770 
End bp554158 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content65% 
IMG OID637781401 
ProductPDZ/DHR/GLGF 
Protein accessionYP_387037 
Protein GI78355588 
COG category[S] Function unknown 
COG ID[COG3016] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0149292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACTAG CCTTCAGGCT TGCCATACTC GGCCTGCTGA TTCTGACGGC AGGCGGGTGC 
GCCGTTATGC GCCCGCCTGC CTCTTTCCGG CCGCCGGAGC GTGAAGAACA GCTTTTCACC
GCCCTTCAGG CTCCTGTTTC TCCTGCCGCT TTTGCTCAGG CGGCGCTCTC ATACGATTAC
ATTCTGCTGG GCGAGGGGCA CACCTCGGCC TGCGACCATC TGATGCAGGC CCGAATGCTG
CAGGCTCTGG CTGCTGCAGG CATGCGTCCC GCCGTGGGGC TGGAGATGGT GCCCGCGGAA
AAACAGCCCG TGCTGGACAG GTTCGGGCCT TTTGCCGTTG CTGCGGATAC CGCCCTGCAA
CAGCGGCTGG ATGCGGATAC ACTGGAAGAG GCCGTGGACT GGAAAACCGT GTGGGGATAC
CCCTACGATC TGTACAGACC GGTTTTTGAA GCGGCATATG CCGGCGGGCT GCCGCTTTTC
GGGCTTAATG TGCCGCGTGA GGTGGTGCGC AAGGTGAGCC GCGGCGGTAT TGAATCACTG
ACAGACGACG AACGCAGCCT GCTGCCGTCA AAGATTATTT TTCCCTCCGA CGAGCAGCGC
GAGGCGCTGA CCCGTATGTT CCGCAAACAT GACTCCATGC GCAGGGCGCG CCATAACTCC
ACGGCGGAAC AGACCGGCAT GCCGGATACG CCTGCCGCGC CGGAACGCAG GCCTTCCACA
GACACTGCCG CTGCAGACAC GGCCGCTGTG CCGGGCGGCA ATGCCACCGC CCGCACCGCT
CCCGGCTCTG CCGGAATTTC AGCAGTCGAG GCCGGTGCCG CTGCCGCTGA CGGTGAACAC
GGTACCCGTG AACGCTTTTT TCTTGTCCAG TCACTGTGGG ATACGGCCAT GGCCGAAAAC
GCCATGCGGG CGCGTCGCCG CCACGGAGGG CCCGTGGTCG TGCTGGCGGG CAGCGGGCAC
GTGGAACGCG GCTGGGGTCT GGCCCGCAGG CTGGGCATCC TTGACCGCGG GGCACGCGTG
CTGCTGGTCA TGCCGTGGCG TGCCGAAGGT CCCCCCGACC CCGAAGACGG CGATTACTTT
TTCTATTGCC GTGCCAGCCA CCGAAGCCGT ATGGGCTTTA CGCTGGTCAT GGCTGAAGGA
CGGGTGACGG TACAGGACGT GGCGGAGGAT TCCCCCGCCC GGCGTGCCGG ATTCCGCGCC
GGCGATGTGC TGCGTTCTGC CGACGGGGCG CAGGTGAATT CGCTGTGGGA TATGCACAAG
GCCGGTATGC AGGCGGCGCG TGAAAAGCGT CCTGTGGTTT TCGGCGTGCA GCGCGACGGA
GCCATGCTGT CGCTGGAACT GTCTGTGCAG CACGAAGACG GGGCGCAGGA GGACACGGAC
AGGCGGTGA
 
Protein sequence
MGLAFRLAIL GLLILTAGGC AVMRPPASFR PPEREEQLFT ALQAPVSPAA FAQAALSYDY 
ILLGEGHTSA CDHLMQARML QALAAAGMRP AVGLEMVPAE KQPVLDRFGP FAVAADTALQ
QRLDADTLEE AVDWKTVWGY PYDLYRPVFE AAYAGGLPLF GLNVPREVVR KVSRGGIESL
TDDERSLLPS KIIFPSDEQR EALTRMFRKH DSMRRARHNS TAEQTGMPDT PAAPERRPST
DTAAADTAAV PGGNATARTA PGSAGISAVE AGAAAADGEH GTRERFFLVQ SLWDTAMAEN
AMRARRRHGG PVVVLAGSGH VERGWGLARR LGILDRGARV LLVMPWRAEG PPDPEDGDYF
FYCRASHRSR MGFTLVMAEG RVTVQDVAED SPARRAGFRA GDVLRSADGA QVNSLWDMHK
AGMQAAREKR PVVFGVQRDG AMLSLELSVQ HEDGAQEDTD RR