Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0541 |
Symbol | |
ID | 3756487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 552770 |
End bp | 554158 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637781401 |
Product | PDZ/DHR/GLGF |
Protein accession | YP_387037 |
Protein GI | 78355588 |
COG category | [S] Function unknown |
COG ID | [COG3016] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0149292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACTAG CCTTCAGGCT TGCCATACTC GGCCTGCTGA TTCTGACGGC AGGCGGGTGC GCCGTTATGC GCCCGCCTGC CTCTTTCCGG CCGCCGGAGC GTGAAGAACA GCTTTTCACC GCCCTTCAGG CTCCTGTTTC TCCTGCCGCT TTTGCTCAGG CGGCGCTCTC ATACGATTAC ATTCTGCTGG GCGAGGGGCA CACCTCGGCC TGCGACCATC TGATGCAGGC CCGAATGCTG CAGGCTCTGG CTGCTGCAGG CATGCGTCCC GCCGTGGGGC TGGAGATGGT GCCCGCGGAA AAACAGCCCG TGCTGGACAG GTTCGGGCCT TTTGCCGTTG CTGCGGATAC CGCCCTGCAA CAGCGGCTGG ATGCGGATAC ACTGGAAGAG GCCGTGGACT GGAAAACCGT GTGGGGATAC CCCTACGATC TGTACAGACC GGTTTTTGAA GCGGCATATG CCGGCGGGCT GCCGCTTTTC GGGCTTAATG TGCCGCGTGA GGTGGTGCGC AAGGTGAGCC GCGGCGGTAT TGAATCACTG ACAGACGACG AACGCAGCCT GCTGCCGTCA AAGATTATTT TTCCCTCCGA CGAGCAGCGC GAGGCGCTGA CCCGTATGTT CCGCAAACAT GACTCCATGC GCAGGGCGCG CCATAACTCC ACGGCGGAAC AGACCGGCAT GCCGGATACG CCTGCCGCGC CGGAACGCAG GCCTTCCACA GACACTGCCG CTGCAGACAC GGCCGCTGTG CCGGGCGGCA ATGCCACCGC CCGCACCGCT CCCGGCTCTG CCGGAATTTC AGCAGTCGAG GCCGGTGCCG CTGCCGCTGA CGGTGAACAC GGTACCCGTG AACGCTTTTT TCTTGTCCAG TCACTGTGGG ATACGGCCAT GGCCGAAAAC GCCATGCGGG CGCGTCGCCG CCACGGAGGG CCCGTGGTCG TGCTGGCGGG CAGCGGGCAC GTGGAACGCG GCTGGGGTCT GGCCCGCAGG CTGGGCATCC TTGACCGCGG GGCACGCGTG CTGCTGGTCA TGCCGTGGCG TGCCGAAGGT CCCCCCGACC CCGAAGACGG CGATTACTTT TTCTATTGCC GTGCCAGCCA CCGAAGCCGT ATGGGCTTTA CGCTGGTCAT GGCTGAAGGA CGGGTGACGG TACAGGACGT GGCGGAGGAT TCCCCCGCCC GGCGTGCCGG ATTCCGCGCC GGCGATGTGC TGCGTTCTGC CGACGGGGCG CAGGTGAATT CGCTGTGGGA TATGCACAAG GCCGGTATGC AGGCGGCGCG TGAAAAGCGT CCTGTGGTTT TCGGCGTGCA GCGCGACGGA GCCATGCTGT CGCTGGAACT GTCTGTGCAG CACGAAGACG GGGCGCAGGA GGACACGGAC AGGCGGTGA
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Protein sequence | MGLAFRLAIL GLLILTAGGC AVMRPPASFR PPEREEQLFT ALQAPVSPAA FAQAALSYDY ILLGEGHTSA CDHLMQARML QALAAAGMRP AVGLEMVPAE KQPVLDRFGP FAVAADTALQ QRLDADTLEE AVDWKTVWGY PYDLYRPVFE AAYAGGLPLF GLNVPREVVR KVSRGGIESL TDDERSLLPS KIIFPSDEQR EALTRMFRKH DSMRRARHNS TAEQTGMPDT PAAPERRPST DTAAADTAAV PGGNATARTA PGSAGISAVE AGAAAADGEH GTRERFFLVQ SLWDTAMAEN AMRARRRHGG PVVVLAGSGH VERGWGLARR LGILDRGARV LLVMPWRAEG PPDPEDGDYF FYCRASHRSR MGFTLVMAEG RVTVQDVAED SPARRAGFRA GDVLRSADGA QVNSLWDMHK AGMQAAREKR PVVFGVQRDG AMLSLELSVQ HEDGAQEDTD RR
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