| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0518 |
|---|
| Symbol | |
|---|
| ID | 3756502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 525303 |
|---|
| End bp | 526799 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637781378 |
|---|
| Product | 6-aminohexanoate-cyclic-dimer hydrolase |
|---|
| Protein accession | YP_387014 |
|---|
| Protein GI | 78355565 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.492304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC AGTCAGACAC CCCGCCATAT GCCGCCCTTT CCATGCAGGA ACTGGGAACA
CTGGATGCCG TGGCCCTTCG GGGGCTTATC CGCTCCGGCC AGATTACGCC GGACGAAGTG
CTGCATACCG TATTTCAAGC CATGGAGGCA CTGAATCCGG CCATCAACGC CGTGGTGCAG
CCCATGAAGA CGCAGGCATA TGCCGAACTG CGGCATATTG ATCCGGAAGC GGCTCTCTAC
GGAGTACCGT ATCTGCTCAA AGACCTGGGC CCGTCATACG CGGGTGTGCC CACCCGCATG
GCGTGCATGG CGCTGAAAGA CGGCTTTTTT CCCGGCGAAG ACAGCCACCT GACACACCGC
TTCCGCACGC TGGGCATGGT GCCGGCAGGC AAAAGCGCAA CGCCGGAATT CGGCCTGACA
GCCACCACGG ACAGTGTGCT GCACGGCCAG ACACGCAACC CGTGGGATGT GACCCGTTCT
CCGGGCGGTT CCAGCGGTGG TTCAGCTTCT GCCGTGGCAG CCGGTATCGT ACCCGTTGCA
CATGGCAACG ACGGGGGCGG CTCCATACGC ATTCCTGCTG CAGCCTGCGG TCTGGTGGGC
TTCAAATGCA GCCGGGGTCT GCTTTCATGG GCGCCGGAGC TGGGAGAATG CTGGGGCGCG
CTTGCCACCA ACGGCGTGCT GACACGCACC GTACGCGACA GTGCGGCAGC CCTTGACGGG
CTGTGCGGCA CAGGGCTGGG CGACCCGTAT CCTTTTCCGC GGCCGCCGCT GCCGTTCAGT
ACCGAAATAC GCAGAGCAAC CGGACGGCTG AAGATAGGAT ACGCCCTGCA GTGGCCCGCC
GGAGCGGCCC CCGCGTCCGA AGACTGCCGC AATGCGGTCA TGCACACGGC CCGTCTGCTG
GAAGGCATGG GACACCATGT GGAAGAAGCA GCTCCCGACC TGCACTGCGA CGAAGTGGCC
GACATTTTCA TGACCATTGT CGCCGCACAG GTGATAGTCA CGCTGGGCCC GCTCATTTCG
CCCGCAGGCA TGCCGGATGA ACGCCATGCC GAAAAACTGA CCCGCCTTCT GTGGGAAAAA
GGGCAGCGCG AAACCGGCGC ACACTATGCG GGTGCACTCA ACCGCATGCA CCTGCTGGGA
AGGGCCATGG CCCGCTTTTT CGAGCGCTAC GACGTGCTGC TGACGCCTGT CATGACCACG
CCCCCCGCAA AGCTGGGCGC ATATTCCCTG CAGCAGATGG AGCTGGACGA CTATGCCGCC
ATGCTGGGAA CATTCATTCC CTATACGCCG CCCTTCAACA TGGCCGGTTC ACCCGCCGTA
TCGCTGCCGC TGTATGCCAC TGAACACGGT CTGCCCGTGG GTGTTCAGCT GGGCGCAGGC
ACAGGCCGCG ACGGGCTGCT GTTCCGTCTG GCTGCCCGGC TGGAGGAGGC CGCTCCGTGG
CACACACGCG TTCCCGCCGT GCATGTTTCA CGGCTGGAAA CCACAGGCAG ACACTAA
|
|---|
| Protein sequence | MTTQSDTPPY AALSMQELGT LDAVALRGLI RSGQITPDEV LHTVFQAMEA LNPAINAVVQ
PMKTQAYAEL RHIDPEAALY GVPYLLKDLG PSYAGVPTRM ACMALKDGFF PGEDSHLTHR
FRTLGMVPAG KSATPEFGLT ATTDSVLHGQ TRNPWDVTRS PGGSSGGSAS AVAAGIVPVA
HGNDGGGSIR IPAAACGLVG FKCSRGLLSW APELGECWGA LATNGVLTRT VRDSAAALDG
LCGTGLGDPY PFPRPPLPFS TEIRRATGRL KIGYALQWPA GAAPASEDCR NAVMHTARLL
EGMGHHVEEA APDLHCDEVA DIFMTIVAAQ VIVTLGPLIS PAGMPDERHA EKLTRLLWEK
GQRETGAHYA GALNRMHLLG RAMARFFERY DVLLTPVMTT PPAKLGAYSL QQMELDDYAA
MLGTFIPYTP PFNMAGSPAV SLPLYATEHG LPVGVQLGAG TGRDGLLFRL AARLEEAAPW
HTRVPAVHVS RLETTGRH
|
|---|
| |