| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0508 |
|---|
| Symbol | |
|---|
| ID | 3756531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 516654 |
|---|
| End bp | 517496 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637781368 |
|---|
| Product | signal peptide peptidase A |
|---|
| Protein accession | YP_387004 |
|---|
| Protein GI | 78355555 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTTA TACTGGTGGC TGTGGCCCTC TTCTGGGGGG CCATGGCCAC TTTGCGTTTG
CTGTTCGGCG ATGAAGATTT TTCGGGCGGC CAGCGGCTGG GTCTCATCAA CGTGCAGGGC
ATGCTGCTGG ACACCACCCC CTATGTTGAT TTTGCCGAAG AACTGCGCCG CGACCCCGAC
GTGCGCGGGG TGCTGCTGCG GGTCAATTCG CCGGGCGGGG CGGTGGCGCC TTCGCAGGAG
CTGCACGACG CGGTGAAGCG TCTTGCGACA AGCAAGCCTG TGGTTGTTTC CATGGGGGCC
GCTGCTGCTT CCGGCGGCTA CTACATATCT GTTCCGGCAA CCCGCATTGT GGCCAATCCT
TCCACGCTTA CGGCCAGCAT CGGCGTAAAG ATGGAAATGG GCAACGTGCA CGAGCTGATG
AAGGCGCTGG GCATACACCA TGTGGCGCTG ACCAGCGGCG AGTTGAAAAA TGCCGGTTCT
CCCTTTGCGG AGATGACCCC CCGCGAGCGG GAGTATCTGC AGTCCGTTGT GATGGATATG
TACGACCAGT TTGTGCAGGC CGTGGCCGAA GGACGGCATC TGCCGCCCGA GGATGTGCGG
CTGGTTGCGG ACGGCCGGGC CATGACCGGC AGACAGGCGT TGCAGGCGGG GTTGGTTGAT
ATGCTGGGAG ACAGACATAC GGCCATGCAG GAACTGCTGC GGCTGTGCAA CGCCACGGGG
GAACTGCCGG TGCAGGCGGG CCCCGAAGAA AAACGCAGCA TTCTGCGCGA GCTGTTTCTT
TCCGTGCTGC CTGCCGGTGT CATTTCCGGT ATGGACGATG CCCCGTACCG CTTTTTCTTT
TAA
|
|---|
| Protein sequence | MMLILVAVAL FWGAMATLRL LFGDEDFSGG QRLGLINVQG MLLDTTPYVD FAEELRRDPD
VRGVLLRVNS PGGAVAPSQE LHDAVKRLAT SKPVVVSMGA AAASGGYYIS VPATRIVANP
STLTASIGVK MEMGNVHELM KALGIHHVAL TSGELKNAGS PFAEMTPRER EYLQSVVMDM
YDQFVQAVAE GRHLPPEDVR LVADGRAMTG RQALQAGLVD MLGDRHTAMQ ELLRLCNATG
ELPVQAGPEE KRSILRELFL SVLPAGVISG MDDAPYRFFF
|
|---|
| |