Gene Dde_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0506 
Symbol 
ID3756529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp513506 
End bp514798 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content62% 
IMG OID637781366 
Producthypothetical protein 
Protein accessionYP_387002 
Protein GI78355553 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.912527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGCG TTTATTCGAT AAGTCTCGGC TGTCCCAAGA ACCGCGTGGA CACCGAGTGG 
CTGCTGGGCG TGCTGGGGCC GGAGGTCCGA CCCGTCCGGG AGATGGCGGA TGCCGACCTT
GTACTCATCA ATACCTGCGG GTTCATTGCT CCGGCGGTGG AAGAGTCTGT CCGGACGGTG
GTCGAGGCCG TGGCCGAACT GGAAGACCTG CCCCGCAGGC CGCTGCTGGC TGTGGCCGGC
TGTCTGGTGG GCCGGTACGG CCGGCAGGAC CTGGCCGCAG AACTGCCCGA GGTTGATCTG
TGGCTGACCA ACAGAGATAT GGATGCATGG CCGGAGATGA TAGGCCGCGC GCTGGGAGTT
GCGGTGCATG TGCCGCCGGT GCGTCTGCTT TCCACCGGTC CGTCATATGC CTACCTCAAG
GTCAGCGACG GCTGCGGCCA TAACTGTTCT TTCTGCACCA TACCTTCCAT CCGCGGCGGG
CTGGTGTCCA CTCCGGCCGA CGTGCTGGAA GCGGAGGCCG TCAACCTGCT TTCCCGCGGG
GTGAAGGAGC TGATATTTGT GGCGCAGGAT GTTGCCGCCT ACGGCAGAGA CATGGGACTC
AGGCACGGTC TGCGTTCGCT GCTGGACAGG CTGCTGCCGC TGGACGGGCT GGAACGGCTG
CGGCTCATGT ATCTGTATCC TGCCGGTCTT GATGCCGGTC TGCTCCGTTA TCTGCGTGAT
GCGGGCAAAC CTTTTGTGCC GTATTTTGAT ATTCCCGTGC AGCACGCCCA TCCTGATGTG
CTGTCGCGCA TGGGACGTCC TTTTGCCCGC AACCCGCGCG AGGTGGTGGA CCGCGTGCGC
GATGTCTTTC CCGAAGCGGC GCTGCGCACG TCCATCATAG TGGGCTTTCC CGGTGAGACA
CAGCAGCACT ACGACCATCT GACGCGCTTT GTGCAGGATG TGCGTTTTAT GCATCTGGGC
GTGTTTGCCT ATCGTGCCGA AGAAGGCACC CCCGCAGCCG GCATGCCCGG TCAGGTGGAT
GAAGTGGAAA AAGACTGGCG CCGCGATGCC CTGATGGAAG TGCAGGCAGA GATAAGCGAA
GAAATTCTGG AAGGGTTTAC CGGCAGCGAC GAAGACGTGC TGGTGGACGC CGCGCACGAG
GAGTGGCCGG GGCTGCATGT GGGCCGCACA TGGTTTCAGG CACCGGAAAT TGACGGCGTG
ACCTACATAA GCGGACCGGG GGTGAAACCC GGAGCCATGG TGCGTGCCGA GATAGTGGAA
TCGCGGACCT ATGATCTTGT GGCACTCTCA TAA
 
Protein sequence
MISVYSISLG CPKNRVDTEW LLGVLGPEVR PVREMADADL VLINTCGFIA PAVEESVRTV 
VEAVAELEDL PRRPLLAVAG CLVGRYGRQD LAAELPEVDL WLTNRDMDAW PEMIGRALGV
AVHVPPVRLL STGPSYAYLK VSDGCGHNCS FCTIPSIRGG LVSTPADVLE AEAVNLLSRG
VKELIFVAQD VAAYGRDMGL RHGLRSLLDR LLPLDGLERL RLMYLYPAGL DAGLLRYLRD
AGKPFVPYFD IPVQHAHPDV LSRMGRPFAR NPREVVDRVR DVFPEAALRT SIIVGFPGET
QQHYDHLTRF VQDVRFMHLG VFAYRAEEGT PAAGMPGQVD EVEKDWRRDA LMEVQAEISE
EILEGFTGSD EDVLVDAAHE EWPGLHVGRT WFQAPEIDGV TYISGPGVKP GAMVRAEIVE
SRTYDLVALS