| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0481 |
|---|
| Symbol | |
|---|
| ID | 3756543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 490262 |
|---|
| End bp | 491662 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637781341 |
|---|
| Product | undecaprenyl-phosphate galactosephosphotransferase |
|---|
| Protein accession | YP_386977 |
|---|
| Protein GI | 78355528 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGG GATGTACGCT GCAGGGCGGT TGCCGGCTGA TGACTTCCGG CATGCGTATG
ACGCTGCTGA TGCTGGCATC GGATATCTTT GCACTGGTCT GCGCCATCGG GGCCGCTGTG
GTGGTCCGGT ATCTGTTTGA CGGGCAGTTT CATATTTCCT TTTATCTGCG GTGTGCGCCG
GTGGTGGTGT TTTTTCTGGC GGCATATGCC ATGCGCGGGC TTTATCCCGG AGTACTGATG
GCTCCTCATG AGGAACTGAA AGGCCTGACA CTGGGTACAA CATTGATTTT CTTCTTTCTC
ATCACCACCA CCTTTTTTTT CAAAGCCAGT GAAGAATTTT CGCGTCTGGT GATGCTGGGC
GGATGGCTGG GGTCGGTCAT TCTGGTGCCG TTCTGCCGTA TTGCCGTGCG CCGGCGGTTT
TCACGCCGGC CGTGGTGGGG GATTCCCGCC GTGATATGGG GGGCAGGAGC CGACGCCGAC
ACATTGGCCG GGCGCTTCAG TAAAGACCGG CGGCAGGGGA TCAGCGTGCT TGGCACGGTG
CAGCCCGATG ATGCAGGCGA TGACCGCCTG CAGCCGCTGA GAGAGTACGC CGCCATGCGA
CCGCAGCCCA TGCTGGTGTG CACGCCTGAA AGTCGCGATT TGTTTTTTTC CGACGAGGTG
CTGCGTATCG AGGAATTGTT TGAGCGGACG CTGGTCATGC CGCCCAAGGC TTTCGATGCA
CTTAATGTTC AGGTGCGCGA TGTGGGGGGT GTGCTTTTTT TCCAGATGCA GACCAAACTG
CTCGACCCTG TGCGCCAGCG GCTTAAGCGG ACACTGGACC TGACGGTCAT CATGCTGGCG
CTGCCCGTGC TGCTGCCGGT CATGGCGGTG CTGGCCGCCG CGGTGCGTCT GGAAGGGGGC
GGACCGGTCT TTTATTCACA GCCGCGCATC GGACGGTGGG GCAGACACTT CAGAATCATC
AAGTTCCGGA CCATGGTGTG CAATGCGGAT ACGGTGCTGC AGCAGCATCT GGCGCAGCAC
CCCGAACTGG CCGAAGAATG GGCTGAAAAT CAGAAGCTGC GCTGTGATCC GCGTATAACC
GCCATTGGCG GCTTTTTGCG GCGTACCAGT CTGGACGAAC TGCCGCAGCT GCTTAATGTG
CTGCGTGGTG AAATGAGTCT GGTGGGGCCC CGGCCCATAG TGGATGCGGA AGTACCGCGT
TATGGCGAGG CGTTTGAACT GTACAAGCGC ACTCTGCCGG GCATTTCAGG CTTGTGGCAG
ATATCCGGAC GCAATGACAC GACGTATGAA GAGCGTGTGA TGCTGGATAC CTATTATTCA
CGCAACTGGT CGGTGTGGAT GGATCTGCAT GTGCTTTCAC GCACATTGTG GGTGGTTATT
AAACGCAGCG GTGCATACTA G
|
|---|
| Protein sequence | MNEGCTLQGG CRLMTSGMRM TLLMLASDIF ALVCAIGAAV VVRYLFDGQF HISFYLRCAP
VVVFFLAAYA MRGLYPGVLM APHEELKGLT LGTTLIFFFL ITTTFFFKAS EEFSRLVMLG
GWLGSVILVP FCRIAVRRRF SRRPWWGIPA VIWGAGADAD TLAGRFSKDR RQGISVLGTV
QPDDAGDDRL QPLREYAAMR PQPMLVCTPE SRDLFFSDEV LRIEELFERT LVMPPKAFDA
LNVQVRDVGG VLFFQMQTKL LDPVRQRLKR TLDLTVIMLA LPVLLPVMAV LAAAVRLEGG
GPVFYSQPRI GRWGRHFRII KFRTMVCNAD TVLQQHLAQH PELAEEWAEN QKLRCDPRIT
AIGGFLRRTS LDELPQLLNV LRGEMSLVGP RPIVDAEVPR YGEAFELYKR TLPGISGLWQ
ISGRNDTTYE ERVMLDTYYS RNWSVWMDLH VLSRTLWVVI KRSGAY
|
|---|
| |