Gene Dde_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0480 
Symbol 
ID3756542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp488911 
End bp490269 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content58% 
IMG OID637781340 
Producthypothetical protein 
Protein accessionYP_386976 
Protein GI78355527 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAA CTGGTTCCTT TGGTGAACAG TATGGCCGCT CTGGCACGCA AACGGTGGCA 
CGCGCTGCCG CTTTTTCCGC GTCTGCCCTG CGCCGGCTGA AAGTCTGGCT CGGGCAGGAA
AAGATTGTGG CGCAATCGTA TGCCCTGCTG CGTGTTGTTT TTTTTGCCGG TTGTCTGCTT
TCTCCGCTGG GCAAGGCGTT TCAGGTGGGT GCCGGTGTTG CCGGACTTGT TCTGCTGGCG
GCGTATTACA CCGGCGGGTA TGCCCGTTCC AATCTGGCCC GTCTGCCGTT CCGCTGGATT
TTCGCCGTTT TTTTTCTCTA CCCGTTTGCG GCGACGATTT TTTCGCAGTG GCCGGGGCAC
AGCTTCGGAT ATACAAAACA TATTCTGCAT GAATCATTTC CTTTGTTTTT TATGGGATTG
GAATGCATCA GGTCGCCCCG TGACATGCGC ACGGCGGGTG TGTGTCTGCT GCTGGCAGTA
TTCGGGCAGG GGGCCGACGG CATGTGGCAG TTCGTGACGG GGTACGATCT GATTAACGGT
ACCCCCGTAA CTGTTGACGG CAGGCTGACA GGATCCATGG GGACATACCG CGTGGGCAAT
TATCTGGCCA TCGCCATGGT GCCGGCACTG CTCACGTTCT GGGCTCTGCC CCGAAGCCTG
TCCGTCCGGT GGCGCAGCCT GTTTGTGGCC GCTGTTTCCG TCCCTCCGTT TTTTGTGCTG
GTCATGTCGC AGACGCGCAG CGCCATGCTG GGGCTTGCCG GTGCGTTATA CTGCTATGCC
GTGCTCTGTC TGCGTGTGCA CCGCAGGCTG CTGATGGTGC CGCCTGTGCT GCTCGGTATT
CTGCTGCTGG CAGGGCCGGA CAGAATCCGT CTGTCCACCG CGCTGCGTGA CGGCCGCTGG
GAGCTGTGGG AAGCGGCATG GCGTATCTTC CGCGAGCATA TGTGGTTCGG CACGGGAGCA
AGCACTTTCA ATCCGGCGTT TAACAGCATG GGCATAACGC TTGTCATCAA TGACAACACC
ATTCCGCATC CGCATGGTAT TTTTGTACAG TTTCTTTCAG ATGGCGGCAT TGCGGGTTTT
CTGCTGCTTG CCGGTGTTCT GGCGGGTATA GGTTTTATCT GGTGCGGCAT CCGGGTATGG
AAAGGTGTCC GTGCGGCAGA CGTGGATGAA ATCCGCTACT GGCGTATGGC CGGTCTGTTG
TGGGCGGGGT TTGCCGCATA TCTCGGAACC GGTGTGTTCG GCCATAATTT TTACCGGACA
TGGTGGCTTG CCATGGGACT TATGATGTTT GGGTGTATCA TGGGAGCGGT GGTTTCCGCC
GGCAGGTGCA CCCGCGGGGA GGCTGTGCCC CATGAATGA
 
Protein sequence
MQETGSFGEQ YGRSGTQTVA RAAAFSASAL RRLKVWLGQE KIVAQSYALL RVVFFAGCLL 
SPLGKAFQVG AGVAGLVLLA AYYTGGYARS NLARLPFRWI FAVFFLYPFA ATIFSQWPGH
SFGYTKHILH ESFPLFFMGL ECIRSPRDMR TAGVCLLLAV FGQGADGMWQ FVTGYDLING
TPVTVDGRLT GSMGTYRVGN YLAIAMVPAL LTFWALPRSL SVRWRSLFVA AVSVPPFFVL
VMSQTRSAML GLAGALYCYA VLCLRVHRRL LMVPPVLLGI LLLAGPDRIR LSTALRDGRW
ELWEAAWRIF REHMWFGTGA STFNPAFNSM GITLVINDNT IPHPHGIFVQ FLSDGGIAGF
LLLAGVLAGI GFIWCGIRVW KGVRAADVDE IRYWRMAGLL WAGFAAYLGT GVFGHNFYRT
WWLAMGLMMF GCIMGAVVSA GRCTRGEAVP HE