Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0374 |
Symbol | |
ID | 3756345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 367903 |
End bp | 369609 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637781234 |
Product | rhodanese-like protein |
Protein accession | YP_386870 |
Protein GI | 78355421 |
COG category | [R] General function prediction only |
COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCAGA ATATCGTCGT TATCGGCGCC GTTGCGCTAG GTCCCAAAGC CGCATGCCGT TTCAAGCGGC TGTGCCCCGA AGACAACGTC ATCATGATCG ACCAGTCCGA CCGCATCTCT TACGGCGGCT GCGGTATTCC CTACTATGTT TCGGGCGAGG TCAACACGCT TGAAGAGCTG CAGATGACCC CCTACCACAC CATCCGCGAC GCCGAATTTT TCCGGGTGAA CAAAGACGTC AAGGTGCTGG CCCGCACCAA GGTCGAATCC ATCGACCGGC AGGCCAAAAA AGTACTCATC AGAGACCTGA CCACAGGTGA GACAGCAGAA CTGCCCTACG ACAAGCTGGT GCTGGCCATG GGCAGCGCAC CCAACCGTCC CCCGTTTGAA GGCATTGACC TTGAAGGCGT GCACACCTGC ACCACGCTGG ACGACGCGCA GGCCATCCGC GAAGCCGTGG CCGCCGGTTC CGTAAGCGGT GCCGTGGTTG TGGGCGGCGG CTTCATAGGC CTTGAAGTGG CTGTCTCGCT GGCCGACATG TGGGGCATCA AAACATCTGT GGTGGAAATA GCAGACCAGA TTCTGCCCGG TTTTCTGAGC GGCAACATGG TCAAGATTGC CACACACGAT CTGCGCAAAA ATGACGTGGA CGTCTTCTGC GGCGAAAAAG TCATCCGCAT CGAAGGCGAA AACGGCAAGG TTGCCCGTGT GGTCACCGAC AAACGCACCA TTGACGCCGA ACTGGTAGTC ATGGCGGCAG GCATCCGACC CAACACCGAA ATTGCCCGTG CAGCCGGTAT CGAGCTGAAC GAACGCGGCG CCATTATCGT CAATGACCGC ATGCAGACGT CCGACCCCGA CATCTATGCC GGCGGCGACT GCGTAACCGT GCCCAATCTG GTTACCGGCA AACCCGGCTT CTTCCCTCTC GGCTCCATGG CCAACAGACA GGGACGCGTC ATCGGCACCA ACCTTGCCGG CGGCGATGCC CGGTTCCCCG GCGGCGTGGG CACCTGGGCC GTCAAACTGT TTGAACAGAA CGCGGCCGGT GCGGGTCTGA CCATCGAGTC GGCCCTGCGC GAAGGATTTG ATGCGGTCAA CGTGCACGTG GAAGGCTTCG ACCGCGCTCA CTTCTACCCC GAACACACCG TCATGGCACT GGATCTGGTT GTGGAACGCC CCACCCGCCG CGTACTGGGC ATTCAGGGCA CCAGCAGTCT GGGCGACGCG CTTGTGGCCC GCATCAATGC CGTGGCGCCG CTGCTGCAGA ACAAACCCAA GCTGGAAGAC ATATCCAACC TTGAAGTGGC TTACTCGCCG CCTTTCGCCT CTGCCATGGA CATCATCAAC ACCGTGGCCA ACGTGGCGGA AAACGTGCTT GAGGGCCGCA ACCACACGCT GGACCCCGAT GAATTCGCCG TCATGTGGCA GAACCGCGAG TCGGGCAGCT GCACCTTTGT GGACACGCGT CTGGCCTCCA ACGCTGAATC GCTGGTGGAA AAATACCCCG GTCAGTGGCT TTCCATTCCG CTGGAAGAAA TGGAGCAGCG CCTCGACGAA ATACCCGAAG ACAAGACCGT GGTGCTTATC TGCAACACCG GTCTGCGTTC CTTTGAATCG CAGCTGATCA TGAACCGTCA CGGCCGCAAA AGCCTGAGCG TTCAGGGCGG CATGGCTTCG GTGACCAAGC AGGGCAACGA AATCTGA
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Protein sequence | MPQNIVVIGA VALGPKAACR FKRLCPEDNV IMIDQSDRIS YGGCGIPYYV SGEVNTLEEL QMTPYHTIRD AEFFRVNKDV KVLARTKVES IDRQAKKVLI RDLTTGETAE LPYDKLVLAM GSAPNRPPFE GIDLEGVHTC TTLDDAQAIR EAVAAGSVSG AVVVGGGFIG LEVAVSLADM WGIKTSVVEI ADQILPGFLS GNMVKIATHD LRKNDVDVFC GEKVIRIEGE NGKVARVVTD KRTIDAELVV MAAGIRPNTE IARAAGIELN ERGAIIVNDR MQTSDPDIYA GGDCVTVPNL VTGKPGFFPL GSMANRQGRV IGTNLAGGDA RFPGGVGTWA VKLFEQNAAG AGLTIESALR EGFDAVNVHV EGFDRAHFYP EHTVMALDLV VERPTRRVLG IQGTSSLGDA LVARINAVAP LLQNKPKLED ISNLEVAYSP PFASAMDIIN TVANVAENVL EGRNHTLDPD EFAVMWQNRE SGSCTFVDTR LASNAESLVE KYPGQWLSIP LEEMEQRLDE IPEDKTVVLI CNTGLRSFES QLIMNRHGRK SLSVQGGMAS VTKQGNEI
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