| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0358 |
|---|
| Symbol | |
|---|
| ID | 3756368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 346760 |
|---|
| End bp | 347785 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637781218 |
|---|
| Product | NAD-dependent epimerase/dehydratase family protein |
|---|
| Protein accession | YP_386854 |
|---|
| Protein GI | 78355405 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGAT ATACCGAACT GCTCCGTCAA TTGCAGGAGG CTCCCCGCAC ATGGCTCATA
ACCGGCGTGG CGGGCTTCAT AGGCTCCAAC CTGCTTGAAA CCCTGCTCAG CCACGGCCAG
ACCGTCACCG GTCTTGATAA TTTCATGACC GGACACAGAA AAAACCTCGA CATGGTGCGC
GACGCTGTCA CTCCGGAACA GTGGAGCCGC TTCCGGTTCA TCGAAGGTGA CATCCGCTCG
CTGGAAACCT GCCGCGAAGC GTGCGCCGGC GCGGACTACG TTCTGCATCA GGCTGCGCTC
GGTTCGGTAC CGCGTTCCAT TGATGACCCG CTGCTGACCA ATACCTGTAA CATCGACGGC
TTTGTAAACA TGCTGGTGGC CGCACGCGAT GCGGATGTCC GCAGATTTGT CTACGCCGCT
TCCAGCTCGA CCTACGGTGA CGAGCCCAAC CTGCCCAAGC AGGAAGACCG CATCGGCAGG
CCGCTTTCGC CGTATGCCGT TACAAAGTAT GTCAACGAAC TGTATGCAGA CGTCTTTGCC
AGAACCTACG GCATGGAATG CACCGGACTG CGCTATTTCA ACGTATTCGG CAAACGTCAG
GATCCTGAAG GCGCCTATGC CGCGGTCATC CCGCTGTGGT TTGCCGGTCT GCTGCGCGAC
CAGCCAGTAT TCATAAACGG TGACGGCGAA ACCAGCCGCG ACTTCTGTCA CATAGACAAC
ACTGTGCAGG CCAACCTGCT GGCGGCCACC GCTCCCGATC CCGAAGCAAC CAATACTGTA
TACAACGTGG CCTTCGGAGA ACGCACATCG CTGACCGAAC TGTACGGCCT CATCCGCGAG
GAAGTGGCGC GCCACAATCC GCATGCGTCA GAAAAAGAAG CACAGTACCG CGATTTCCGC
GCGGGCGACG TGCGCCACTC TCTGGCTGAT ATCAGCCGTG CCCGCACCCT GCTGGGCTAT
GATCCGCAGA TTTCCGTCCG TCAGGGGCTG CGCATTTCCG GCGACTGGTA CGCAGCAAAC
CTGTAG
|
|---|
| Protein sequence | MSRYTELLRQ LQEAPRTWLI TGVAGFIGSN LLETLLSHGQ TVTGLDNFMT GHRKNLDMVR
DAVTPEQWSR FRFIEGDIRS LETCREACAG ADYVLHQAAL GSVPRSIDDP LLTNTCNIDG
FVNMLVAARD ADVRRFVYAA SSSTYGDEPN LPKQEDRIGR PLSPYAVTKY VNELYADVFA
RTYGMECTGL RYFNVFGKRQ DPEGAYAAVI PLWFAGLLRD QPVFINGDGE TSRDFCHIDN
TVQANLLAAT APDPEATNTV YNVAFGERTS LTELYGLIRE EVARHNPHAS EKEAQYRDFR
AGDVRHSLAD ISRARTLLGY DPQISVRQGL RISGDWYAAN L
|
|---|
| |