Gene Dde_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0343 
Symbol 
ID3756353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp333017 
End bp334537 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content62% 
IMG OID637781203 
Productcobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) 
Protein accessionYP_386839 
Protein GI78355390 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1797] Cobyrinic acid a,c-diamide synthase 
TIGRFAM ID[TIGR00379] cobyrinic acid a,c-diamide synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCCGC TCATCACCAT TGCCGGAACC CACAGCGGGT GCGGCAAAAC AACAGTCAGT 
CTGGCACTTA TGGCTGCCTT GCGCCGCGCC GGATTTGCCG TGCAGCCGTT CAAGGCAGGG
CCGGACTTTA TTGATACGGG GCACCACGGC ACCGTAACCG GACGGCAGGG CCAGAATATT
GACGGCTGGA TAATGGGCCG TCAGGCGTGC TGTGAACTGG TATCACGCGC CATGAGCAAT
CCCGCGGGGC ATCCTGCGGA CATCGGTGTC ATTGAAGGCG TTATGGGCCT TTTTGACGGC
GCGTCCGGCT CGTGCGACAG CGGCTCCACC GCGCAACTGG CCTCATGGCT GCAAGCCCCC
GTGGTGCTTG TTGCGGATGC ACGCTCCATG GCCCGTTCCG CCGCGGCGCT GGTGTCCGGT
TATGTCCGGT TTGACCCGCA TCTGCCGTTT GCAGGCGTTA TCTTCAACAG GGTGGGCAGC
AGCAACCACC GCAGTCTCAT TGCCGAAGCC ATGCGCACGG CATGTCCGGA CATCCCCGTG
CTGGGCTTTC TGCCACGCGA TGAATCGCTG GAAATACCGG CCCGCCATCT GGGACTGAAC
ACCGCGGCGG AATCTCCGCT GACAGCCGGA GTGCAGGACA GGCTTGCCCG CTGGTTCACG
GCCGGAGCCA GTCTGAACAG CATTCTGACA GCAGCGCGTC GGGCAGCAGC GTCTCAGGCA
GCAACGCGTC AGACCGCAGA ATGTCAGGCA GCAGAACGTG CCGGACAATG TGTTACGCGG
CAGTCCGGTT CAGCACCCGA CGGCATTGTA CAGTCCCGCA GCACTGCACA AACGCCTGTC
CGCATCGGCG TTTCAGCCGA TGAAGCATTC TGCTTTGTCT ATGCTGAAAA CCTGCGGTTG
CTCCAATCAG CCGGAGCCGA ACTGGTCTTT TTTTCACCGC TGCATGATGC GCACCTGCCT
GCCGGCCTGC ATGGGGTGTA TCTGACTGGA GGCTATCCGG AACTTCACGC GGACAGACTG
TATGAAAACA CCCTGATGCG TACCGCTGTA TATGATTTTT CTCTCGCCGG AGGCATAGTG
TATGCCGAGT GCGGCGGCTT CATGTATCTG ATGCAGCAGC TGTACGACCA GCAGGGAGCA
TCGTGGCCCA TGTGCGGCTG CCTGCCTTTT TCATGCGCCA TGGGCACACG CTTCAGGGCG
CTGGGCTACC GGCAGGTACG CACCACTGCG GATTCGCCTC TCGGCGCGGC AGGCACAGTC
CTGCGCGGGC ACGAATTTCA TTACTCGCAC CTGTGCGCGC CGCCCGCCGG AGACGATACA
ATGAATATTA CCAACATCTA TGACGCCACA GACCGCAACG GCACGCCCCT GAACAGCGGT
ACCGGCGACG CCCCCGCAGC GGCAGGCCAC CTGCAGCGCA ACACACTGGG GTCTTACGTG
CACCTGCACT TTGCATCCTG CCCCGACGCG GCCCGCGCTT TTGTCGGCGC ATGCCGCCGT
TCATCCGTAA CCACGCCCTG A
 
Protein sequence
MHPLITIAGT HSGCGKTTVS LALMAALRRA GFAVQPFKAG PDFIDTGHHG TVTGRQGQNI 
DGWIMGRQAC CELVSRAMSN PAGHPADIGV IEGVMGLFDG ASGSCDSGST AQLASWLQAP
VVLVADARSM ARSAAALVSG YVRFDPHLPF AGVIFNRVGS SNHRSLIAEA MRTACPDIPV
LGFLPRDESL EIPARHLGLN TAAESPLTAG VQDRLARWFT AGASLNSILT AARRAAASQA
ATRQTAECQA AERAGQCVTR QSGSAPDGIV QSRSTAQTPV RIGVSADEAF CFVYAENLRL
LQSAGAELVF FSPLHDAHLP AGLHGVYLTG GYPELHADRL YENTLMRTAV YDFSLAGGIV
YAECGGFMYL MQQLYDQQGA SWPMCGCLPF SCAMGTRFRA LGYRQVRTTA DSPLGAAGTV
LRGHEFHYSH LCAPPAGDDT MNITNIYDAT DRNGTPLNSG TGDAPAAAGH LQRNTLGSYV
HLHFASCPDA ARAFVGACRR SSVTTP