Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0336 |
Symbol | |
ID | 3756385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 325803 |
End bp | 326333 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637781196 |
Product | thioesterase family protein |
Protein accession | YP_386832 |
Protein GI | 78355383 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000518739 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGATC GTAAGGTGAG CGACAGCGAT ACCATTATGA CGCACAGAGG CTTGCCGCAG GATGCCAACC CCGCCGGCAA CATCCACGGC GGCACCATTC TGAAGCATAT CGATCTTGCC GGTGCCGTGG CGGCCATGCG TCACGCCAGA GGCCGCACGG TGGTCACCGC GTCCATTGAC AGGATGGAAT TCAAGGCTGC CGTACATGTG GGAGAGCTTA TGGTGCTGAA GGCCAGCGTG AACATGGTCA GTAATACGTC CATGGAAGTG GGGGTACGTG TGGAGGCTGA AAACCTGCTC ACGGGCGAGG TGCGGCATGC TGCTTCGGCA TACCTGACAT TTGTGGCCAT GGATGAAAAC CGCAGACCGA CTGCAGTGCC GGGCCTGATA CTGGAAACGC CCGAGCAGCA CCGCCGTAAC CGCGAAGCCC TGATGCGGCG CGAGGTGCGG CGCGAAGAGC GGCGGCGCGA AAAACTGTCG CAGGAAGGGC AGACTCTGGC CCGTGATGAA GGCGTGAAAG AACTGTACTG A
|
Protein sequence | MNDRKVSDSD TIMTHRGLPQ DANPAGNIHG GTILKHIDLA GAVAAMRHAR GRTVVTASID RMEFKAAVHV GELMVLKASV NMVSNTSMEV GVRVEAENLL TGEVRHAASA YLTFVAMDEN RRPTAVPGLI LETPEQHRRN REALMRREVR REERRREKLS QEGQTLARDE GVKELY
|
| |