Gene Dde_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0335 
Symbol 
ID3756384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp324651 
End bp325655 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content61% 
IMG OID637781195 
ProductKpsF/GutQ family protein 
Protein accessionYP_386831 
Protein GI78355382 
COG category[M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00223142 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGG ACGCACAATG CACCCGCCGC ACGGACTGGA TTCCGCTGGC GCGCGAGGTG 
CTGGATATTG AAATTGAAGG CATTGCCGCC ATGCGCGACA GACTGAACGG CGGTTTTGTG 
GATGCGCTGA CACTGATGGC ACGCTGCACG GGCCGCGTTG TCATTACCGG GCTGGGTAAA 
TCCGGCCTGG TGGGCCGCAA ACTGGCGGCC ACGCTGTCTT CCACGGGAAC TCCCGCTTTT 
TTTCTGCACC CTGTGGAAGG TGCGCACGGC GACATGGGCA TGCTGCGCAG TGATGATGTC 
ATCATCGCCA TATCCAATTC CGGCGAGACT GACGAACTGA ACGCCATTCT GCCCGCATTG 
CGCAGTCTGG GGGCTTCGCT TATCGCCATG ACAGGCGGAC TGGAGTCCAC GCTGGCAAAG 
AGTGCCGATG TGGTGCTTGA TACCGGCGTA CGCCGCGAGG CGTGTCCGCT CAATCTTGCG 
CCCACTGCCT CCACCACGGC TGTGTTGGCC ATGGGCGATG CCCTTGCGGT ATGTCTTATT 
CATTGGAAAT CATTCACCGA AAATGATTTT CTGCGGTTTC ATCCGGGCGG TTCGCTGGGG 
CACCGGCTGA GTATGCGGGT GGAAAGTCTG ATGCATACCG AAAACCTGCC CGTGGTGCGC 
GAGACCGTGC GGACGGGAGA AGCGCTGCGC GTGCTGGACG AGGGACGGCT GGGCACTGTG 
CTGGTGACGG ATGGTCAGGG GCGCCTGTCG GGCATTCTGA CGGACGGCGA CGTGCGCCGC 
ATGGTCTGCC GCGAGGCGGG CGTGGAAACC GCATCGCCGG TGGCCAATGT GATGGTACGC 
AGTCCGCTGA CCGCCAGAAA AGAATTTTCA GTGGCGCAGC TTATTGATAT GATGGAAGAA 
AGAGCTATCA CCGTGCTGCC CATCACCGGT GATGACGGAC TGCTGCTGGG GGTTGTGCAC 
CTGCATGACC TGCTGGGCAA GGGCGGAGTT AAATTTTCGC GCTGA
 
Protein sequence
MTQDAQCTRR TDWIPLAREV LDIEIEGIAA MRDRLNGGFV DALTLMARCT GRVVITGLGK 
SGLVGRKLAA TLSSTGTPAF FLHPVEGAHG DMGMLRSDDV IIAISNSGET DELNAILPAL 
RSLGASLIAM TGGLESTLAK SADVVLDTGV RREACPLNLA PTASTTAVLA MGDALAVCLI 
HWKSFTENDF LRFHPGGSLG HRLSMRVESL MHTENLPVVR ETVRTGEALR VLDEGRLGTV 
LVTDGQGRLS GILTDGDVRR MVCREAGVET ASPVANVMVR SPLTARKEFS VAQLIDMMEE 
RAITVLPITG DDGLLLGVVH LHDLLGKGGV KFSR