| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0275 |
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| Symbol | |
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| ID | 3755293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 265905 |
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| End bp | 267692 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637781135 |
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| Product | oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein |
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| Protein accession | YP_386771 |
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| Protein GI | 78355322 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACATATC AATGGCATTT GAAGCGAAAA GCCCTTGACG GCGGCGGCGT TGCTCGGTTT
AGATGGGGCG ATTTTTCATC GGCAGCCCCT TATCCCCGTA CCGGCGACTG CGGAAGTGCG
CCGGCAAAGC AGGGCACCGC TTTTATGCAA AATTTCATTT GGAGGTACTG GATGAAGCGC
GTCTTGAAAC TCATGCTGCT TGCACTGGTT GCAAGTCTGG CATTCGGCTG CAGCGCCGAG
CCGGAAGAAA AAAAGGCTGA ATCGGCCCCC GCCGAAAAGG CCGCCGAAGC GCCCAAGGCA
GAAAAAAAGG TTCTGCACCT TGCCATGGAT GCCGACCCTG TGTCTCTGGA CCCCCATGTG
CAGCTTTCCG GCGGCATGCT GCAGTATTCG CATCTGGTGT TCGACCCCCT CGTCCGCTGG
ACGCAGGATA TGGCCTTTGA ACCCCGCCTT GCCGAAAAGT ACGAGCGCAT AGACCCCCTG
ACCATGCGCT TTCACCTGCG CAAGGGCGTC AAGTTCCACA GCGGCAATGA ATTTACCGCC
AAAGACGTGG TGTGGACGCT GGCCCGTCTG AAAAAATCGC AGGACTACAA AGCCCTGTTC
GAGCCTTTTG CCGAGCCCAA GATCATCGAC GACTACACCA TCGATCTGAT CACCCACAAG
CCCTACCCCC TGATGCTGAA CATGGCCACC TACATCTTCC CCATGGACAG CAAGTTCTAC
AGCGGAAACG ATGAAAACGG CCAGCCCAAG GACGCCATCG TAAAGACCGG CCCCTCCTTT
GCCAACGTCA ACGAATCCGG CACCGGTCCC TTTACCGTGG AATCCCGCGA ACAGGGCGTG
CGCATGGTAT TCAAGGCATT TCCCGGATAC TGGGGCCCCC GCGGCAACGT GGAAGAAATC
GACCTGAAGC CCATCAAGAA CGACGCCACC CGCGTGGCAT CCATTCTGTC CGGCGATGTT
GATTTCATCA TGCCTGTTCC GCCTCAGGAC TACGACCGTC TGGCCAACCA CGAAACTGTC
AAGCTGATCA CCATGGCCGG TTCGCGCCTG ATCACCCTGC AGATGAACCA GAACCGCGTG
GAAGCCTTCA AGGATCCCCG CGTGCGTCAG GCCGTTGTAT ACGCCACCGA CAATCAGGGC
ATTGCCGAAA AAATCATGAA AGGCCGCGCC ACCGCAGCCG GTCAGCAGAG CCCCGAAGGC
TTCTACAGCT ACGTGCCCGA ACTGGCACCC CGCTATGACC TGGAAAAGGC CAAGCAGCTC
ATGAAGGAAG CCGGCTACGA AAAGGGCTTT GAAGTTACCA TGATCGCCCC CAACAACCGC
TACGTGAACG ATGAAAAGGT CGCCGAAGCG TTTGTTTCCA TGATGGCCAA AATCGGCATC
ACCGTGAACC TGAAGACCAT GCCCAAGGCT CAGTACTGGG ATGAGTTTGA CGCACAGGTG
GCCGACATCC AGATGGTGGG CTGGCACCCC GATACCGAAG ACTCCGCCAA CTACACCGAG
TTTCTGCTGA TGTGCCCCAA TAAGGAAACC GGCTACGGCC AGTACAACAG CGGCAACTAC
TGCAACAAAA AGGTGGACGA GCTGACCATC GCCTCGCAGA GCGAGACCGA CAAGGCAAAG
CGCACCGCAC TGCTGCAGGA AGCTGAAAAA ATCATCTACG AAGAGGCCGC CTACATTCCC
CTGCACTGGC AGCACCTTTC GTGGGCAGTG GGCCCCGGCG TGAAGAATGC AAAGGAAATC
GTCAACGTGA TGGACTTCCC GTACTTTGGC GACCTTGTAA TAGAATAA
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| Protein sequence | MTYQWHLKRK ALDGGGVARF RWGDFSSAAP YPRTGDCGSA PAKQGTAFMQ NFIWRYWMKR
VLKLMLLALV ASLAFGCSAE PEEKKAESAP AEKAAEAPKA EKKVLHLAMD ADPVSLDPHV
QLSGGMLQYS HLVFDPLVRW TQDMAFEPRL AEKYERIDPL TMRFHLRKGV KFHSGNEFTA
KDVVWTLARL KKSQDYKALF EPFAEPKIID DYTIDLITHK PYPLMLNMAT YIFPMDSKFY
SGNDENGQPK DAIVKTGPSF ANVNESGTGP FTVESREQGV RMVFKAFPGY WGPRGNVEEI
DLKPIKNDAT RVASILSGDV DFIMPVPPQD YDRLANHETV KLITMAGSRL ITLQMNQNRV
EAFKDPRVRQ AVVYATDNQG IAEKIMKGRA TAAGQQSPEG FYSYVPELAP RYDLEKAKQL
MKEAGYEKGF EVTMIAPNNR YVNDEKVAEA FVSMMAKIGI TVNLKTMPKA QYWDEFDAQV
ADIQMVGWHP DTEDSANYTE FLLMCPNKET GYGQYNSGNY CNKKVDELTI ASQSETDKAK
RTALLQEAEK IIYEEAAYIP LHWQHLSWAV GPGVKNAKEI VNVMDFPYFG DLVIE
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