Gene Dde_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0272 
Symbol 
ID3755290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp262838 
End bp263797 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content58% 
IMG OID637781132 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_386768 
Protein GI78355319 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGC TGCTTGAAGT CAAAAACATG ACCGTCCAGT TCGCCATGCG CGACACGCAG 
CTCACAGCGG TCGACAATGT TTCGTTTTCC CTGAACAGGG GGGAACGGCT CGGCCTTGTG 
GGCGAATCCG GGGCGGGAAA ATCCGTGACC GGCTTTTCCA TAATCAATCT TGTCAGCAAG 
CCCGGCCGCA TCACCGGCGG TTCCATACTG TTTGAAGGAC ACGACCTGAC CAAAGCTTCG 
CCCGAAGTAC TGCGTCACAT CAGGGGCAAC CGCATCAGCA TGATCTTTCA GGATCCCATG 
ATGACCCTGA ACCCCGTGCT GACCATAGGT ACCCAGATGG TGGAAACCAT TCTGGCGCAC 
AAGAAAGTCT CGGTGAAAGA AGCGGAAGCC ATTGCGCTGG AAAAACTGCG CAAGGTGTAC 
ATACCCTCGC CGGAAAAACG GCTTAAACAG TACCCGCACG AGTTCTCCGG CGGCATGCGC 
CAGCGCATAG TCATCGCCAT CGCGCTGCTT ACCTCGCCCG CGCTTATCAT CGCGGACGAG 
CCCACCACGG CGCTGGACGT GACCATTCAG GCCGAGATCA TGGATTTGCT GCTTGAGCTG 
TGCGAATCGG AAAACATGGG CCTTATTCTC ATCACGCACG ACCTCGGCGT GGTGTCTCAG 
GTCACCGAAA AGATAGCCGT CATGTATGCC GGGCGCATAG TTGAAATGGG CGAAACGGAC 
AAAGTGGTCG CCGCGCCCCA GCATCCCTAT ACCAAAGGTC TGCTGGCCGC CCTGCCGCAG 
GGGGTCAAGG GCAAACGCCT CAACCAGATA CCCGGCATCA TGCCCGGTCT CGGCTCCATT 
CCCCGAGGCT GTGCGTTCAA CAACCGCTGT ACCTGCCGCG AAGACCAGTG TCTTCAGGAG 
CGGCCCTGTC TGGAACTCAA GAAATCAGGC GGCATGGCTG CCTGCCACAT TCTGGAATAA
 
Protein sequence
MSTLLEVKNM TVQFAMRDTQ LTAVDNVSFS LNRGERLGLV GESGAGKSVT GFSIINLVSK 
PGRITGGSIL FEGHDLTKAS PEVLRHIRGN RISMIFQDPM MTLNPVLTIG TQMVETILAH 
KKVSVKEAEA IALEKLRKVY IPSPEKRLKQ YPHEFSGGMR QRIVIAIALL TSPALIIADE 
PTTALDVTIQ AEIMDLLLEL CESENMGLIL ITHDLGVVSQ VTEKIAVMYA GRIVEMGETD 
KVVAAPQHPY TKGLLAALPQ GVKGKRLNQI PGIMPGLGSI PRGCAFNNRC TCREDQCLQE 
RPCLELKKSG GMAACHILE