| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0258 |
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| Symbol | |
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| ID | 3755079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 242466 |
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| End bp | 243647 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637781118 |
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| Product | amino acid ABC transporter, periplasmic-binding protein |
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| Protein accession | YP_386754 |
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| Protein GI | 78355305 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCAG GCCGCGTACG CATGACGCCC GCATACCCGC GGGCAGGAGG TTTTTTCATG
AGCAGAAAAA TGACGGCTTT TGTTCTGGGT GTTGTTGCCA CGGTGCTGAT GGCCGGCACT
GCCATGGCCG GTACCGTTAA AATCGGTCTT ATGTGTCCGC TGACCGGTTC GTGGGCCAGC
GAAGGTCAGG ACATGCGCAA CATTGTTCTG ATGCTGGCCG AACAGACCAA CGCTCAGGGC
GGCATTAACG GCGACATGGT GGAGATAGTG GTCGAGGACG ATGCCGGGGA CCCCAAAACT
GCCGCACTGG CAGCCCAGCG TCTTTCCACC ATGGGTGTTT CGGCCGTCAT CGGCTCATAC
GGTTCGGCCA TTACCGAAGC CTCGCAGGCC ATCTATGACG AGATGGACAT CGTGCAGGTG
GCTACCGGTT CCACGGCCAT CCGGCTTACC GAAAAAGGTC TGCCGTTGTT TTTCCGCACC
TGTCCGCGCG ACGACGAACA GGGCCGCGTG GCCGCAGCCG TGCTGAAGGA AAAAGGCTAT
AAAAAGATCG CCATCCTGCA CGACAACACG TCGTATGCCA AAGGGTTGGC CGAAGAAACG
CTGACTCTGC TGAAAAGCGC AGGCACCGAA GTGGTGTTCT ATGATGCGCT CACTCCCAAC
GAACGTGATT ATTCCGCAAT ACTTACCAAG CTGAAGGCCG CAGGGCCCGA CGCCATATTC
TTTACCGGCT ACTACCCCGA GGCAGGCATG CTGCTGCGGC AGAAGCAGGA AATGAAGTGG
GACGTGCCCA TGATGGGCGG CGACGCCACC AACAACCTTG ATCTGGTGAA AATTGCGGGC
AAATCCGCTG CCGGATTCCT GTTCATCAGC CCGCCCACCC TGCAGGACCT GCCCGACAAG
CAGGCAAAGG ACTTTGCCGC CGCGTACAAG GCCCGCTACG GTACCATGCC TGCTTCCGTG
TGGTCTGTGC TGGCCGGCGA TGCCTTTATC GCTCTGAAGG CCGCCATCAC CGGTGCCGGT
TCCACCGACC CGCAGGATAT TGCCGCGTAC ATGAAAAAAG ATCTCAAGGA TCTGCCGGGT
CTTACCGGTT CGCTTTCGTT CAACGAAAAA GGCGACCGTG TGGGCGACCT GTACCGCCTG
TACCGCGTGG ATGAAAACGG CAACTTTGTA CTGCAGCCGT AA
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| Protein sequence | MASGRVRMTP AYPRAGGFFM SRKMTAFVLG VVATVLMAGT AMAGTVKIGL MCPLTGSWAS
EGQDMRNIVL MLAEQTNAQG GINGDMVEIV VEDDAGDPKT AALAAQRLST MGVSAVIGSY
GSAITEASQA IYDEMDIVQV ATGSTAIRLT EKGLPLFFRT CPRDDEQGRV AAAVLKEKGY
KKIAILHDNT SYAKGLAEET LTLLKSAGTE VVFYDALTPN ERDYSAILTK LKAAGPDAIF
FTGYYPEAGM LLRQKQEMKW DVPMMGGDAT NNLDLVKIAG KSAAGFLFIS PPTLQDLPDK
QAKDFAAAYK ARYGTMPASV WSVLAGDAFI ALKAAITGAG STDPQDIAAY MKKDLKDLPG
LTGSLSFNEK GDRVGDLYRL YRVDENGNFV LQP
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