Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0248 |
Symbol | |
ID | 3755069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 231261 |
End bp | 232388 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637781108 |
Product | chaperone protein DnaJ |
Protein accession | YP_386744 |
Protein GI | 78355295 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.821018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGC GTGACTATTA CGAGGTGCTC GGGGTTTCGC GGGATGCCGC AGACGATGAA ATAAAACGTG CCTACCGCAA AAAGGCCATG GAATTTCATC CTGACAGAAA TCCTGACAAC CCCGAAGCGG AAGCTAAATT CAAGGAAGCC GCGGAAGCAT ACGACGTGCT GCGTGACGCA GAAAAGCGCG CACGGTACGA CCGCTTCGGC CATGCCGGTG TAAACGGCAA CGGCTATGGC GGAGGCGGCG GCTTTTCCAG CACGGAAGAT ATCTTCGCTC ATTTCGGAGA TATATTCGGA GACCTTTTCG GGTTCGCCGG CATGGGCGGT GCGCGCGGTC CGCGTCCGCA GGCCGGTTCC GATCTGCGTT ACAATCTGAA TATTTCTTTC AGACAGGCGG CACGGGGCGA CGAAGTCACC CTGCGCATTC CTAAAAATGT GACCTGCCCC GACTGTTCGG GCAGCGGCGC GGCACCGGGA ACACAGCCCG AAACCTGCCC CCAGTGCGGC GGTTCGGGAC AGGTGGTGCG CCAGCAGGGC TTTTTCCAGA TGGCCATGCC CTGCAGTGCC TGCCGCGGCG AAGGACGTAT AGTGCGCAAC CCGTGTCCGC GCTGCCGCGG TGCCGGGCAG GTGCAGGACA TCCGTGAGCT TTCCGTACGC ATTCCCGCCG GAGTGGATAC CGGCAACCGT CTGCGTCTGC GCGGCGAAGG CGAACCCGGC GTGCACGGGG GGCCCCCCGG CGACCTGTAT GTGGTCATAC GGGTGGACGA CGACAAAACC TTCCGCCGTC AGGGACAGGA CCTTGTGGTG CGCAAAGAGA TTTCCTTTGT GCAGGCCATT CTGGGCGACA AGGTGGAAGT GCCCACGCTG GATGATCCCG TGACCGTGGA TATTCCGCGC GGCACCCAGA GCGGCGAAGT GTTCCGCATC GCCGGCAAGG GGCTGCCTCA TCTCGGCAGC AGCCAGACAG GTGCGCTGCT GGTTGAGGTC ACTGTGCGCA TTCCTTCCAG CGTCAATGAC GAGCAGGAAA AGCTGCTGCG CGAATTTGAG CGGCTGGAAG AGAACAGACC CCTGCGCAAG GTCAAGAATA TGTTCAAAAA GGCCGGCAAG GCCATGGGAA TGGACTGA
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Protein sequence | MSQRDYYEVL GVSRDAADDE IKRAYRKKAM EFHPDRNPDN PEAEAKFKEA AEAYDVLRDA EKRARYDRFG HAGVNGNGYG GGGGFSSTED IFAHFGDIFG DLFGFAGMGG ARGPRPQAGS DLRYNLNISF RQAARGDEVT LRIPKNVTCP DCSGSGAAPG TQPETCPQCG GSGQVVRQQG FFQMAMPCSA CRGEGRIVRN PCPRCRGAGQ VQDIRELSVR IPAGVDTGNR LRLRGEGEPG VHGGPPGDLY VVIRVDDDKT FRRQGQDLVV RKEISFVQAI LGDKVEVPTL DDPVTVDIPR GTQSGEVFRI AGKGLPHLGS SQTGALLVEV TVRIPSSVND EQEKLLREFE RLEENRPLRK VKNMFKKAGK AMGMD
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