Gene Dde_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0227 
Symbol 
ID3755087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp212050 
End bp213519 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content59% 
IMG OID637781087 
Productcarbon starvation protein A, putative 
Protein accessionYP_386723 
Protein GI78355274 
COG category[T] Signal transduction mechanisms 
COG ID[COG1966] Carbon starvation protein, predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTACT TTTTTCTGGC TGTTGCAGCA CTGCTGGTCG GCTACGCCGT ATACAGCAAG 
GTAGTGGAAC GCGCCTTCGG CGCGGATGAA TGCCGGGCCA CACCGGCCTG CACCATGGAA
GACGGTGTGG ACTATGTGAA GATGGATCCC AAAAAAATCT GGCTGATCCA GCTTCTGAAC
ATTGCCGGTC TGGGTCCCAT CTTCGGCCCC ATTCTGGGTG CGCTGTACGG TCCCGCGGCC
CTGCTGTGGA TTGTCATCGG ATCTATTTTC GCGGGTGCTG TGCACGACTA CTTCGCAGGC
ATGATGTCGG TGCGCTACAG CGGCAAATCC ATCCCCGACG CCGTCGGCTA CAACCTTGGT
TCTTTCGCCA AGCACTTCAT GAACGTGTTC GCCGTCATTC TGCTGCTGCT TGTGGGCGTC
GTGTTTGTTC TCGGTCCGGC AAAGCTGCTG GCAGTCAAGC TGGGCTTCGG CCTTGAAGGC
GACGGCGCCG TGGCTACCGC CACCATGATC TGGACGGGCA TCATTTTCTG TTACTACTTT
ATCGCCACCG TACTGCCCGT GGATAAAATC ATCGGCCGGT TGTACCCCCT GTTCGCCGTG
GTGCTGCTTA TCATGGCGTT CGGCCTGACC ATCATGCTCA TCGCCAAGGG ATACGAATTC
TATCCGCAGG GTCTCACGCT TGAAAACCTG CATCCCAAAA ACCTGCCCAT GTGGCCGCTG
ATGTTCATCA CCATCGCCTG CGGTGCCATT TCCGGCTTCC ATGCCACGCA GTCTCCGCTG
ATGGCCCGCT GCGTGCCCGA TGAAAAATGC GGACGCCCCA TATTCTACGG CGCCATGATC
GGCGAAGGCA TCATCGCCCT TATCTGGGCA ACTCTGGGCA TGAGCTTTTT CCACACCCCC
GGAGAACTGC AGGCCGTGCT GGATAACGGC GGCCCCGCAG CCGTGGTGGA TACTGTATCC
ATGACCCTTA TGGGGCCCAT AGGCGGCTTC CTTGCCATCA TCGGCGTGGT GGTTCTGCCC
ATCACTTCCG GTGACACGGC TTTCCGTTCC GCCCGTCTCA TCATTGCCGA CTTCATCAAG
CTGCCTCAGA AGGCACCGGT CAAGCGTCTG TTCATTGCCG TGCCGCTGTT CGCAGTCGGC
TACGCCATCA CGCTCACGCC GTTTGCAGTC ATCTGGCGCT ACTTCGGCTT TTCCAACCAG
CTGCTGGCCA CCATCGTGCT GTGGGCGGGC GCCATGTATC TTGTCCGCCA CGGCAAGGCA
CACTGGATGG CATCCATCCC CGCCACATTC ATGACGGCAG TATGCGCAAC CTACCTTGCC
TACGCCAAAA TCGGCTTCGG CCTTTCCATG GATATCGCAC AGGTTTTCGG CATTGCCGTG
GCTGTGCTGT GCGCCGGTTT CTTCCTGGTG AAGATCCGCA GCGTGCCCGT GGAGCCCGAC
GCCGCCGACG GTCCCGGCCG CATCGGCTGA
 
Protein sequence
MLYFFLAVAA LLVGYAVYSK VVERAFGADE CRATPACTME DGVDYVKMDP KKIWLIQLLN 
IAGLGPIFGP ILGALYGPAA LLWIVIGSIF AGAVHDYFAG MMSVRYSGKS IPDAVGYNLG
SFAKHFMNVF AVILLLLVGV VFVLGPAKLL AVKLGFGLEG DGAVATATMI WTGIIFCYYF
IATVLPVDKI IGRLYPLFAV VLLIMAFGLT IMLIAKGYEF YPQGLTLENL HPKNLPMWPL
MFITIACGAI SGFHATQSPL MARCVPDEKC GRPIFYGAMI GEGIIALIWA TLGMSFFHTP
GELQAVLDNG GPAAVVDTVS MTLMGPIGGF LAIIGVVVLP ITSGDTAFRS ARLIIADFIK
LPQKAPVKRL FIAVPLFAVG YAITLTPFAV IWRYFGFSNQ LLATIVLWAG AMYLVRHGKA
HWMASIPATF MTAVCATYLA YAKIGFGLSM DIAQVFGIAV AVLCAGFFLV KIRSVPVEPD
AADGPGRIG