Gene Dde_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0225 
Symbol 
ID3755085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp207988 
End bp211773 
Gene Length3786 bp 
Protein Length1261 aa 
Translation table11 
GC content61% 
IMG OID637781085 
Producthypothetical protein 
Protein accessionYP_386721 
Protein GI78355272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.290808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGT CACAACGCTG GAACACCCTG CCGCGCAAAG CAAAACTTGC CATACTCTGG 
CTGGCCGGAC TGCTTGCCGT CTGGACAGCC GGCGGTTTTT TTCTGGTACC GCACATCGCG
CGCGACGCTG TGGAAAGCAA CCTGTCGCAG GCTCTGGGAC GCAACTGTTC CGTGGGCGGC
ATGTCGTTCA ACCCGTTCAC GCTTTCCGTC GAGCTGCGCG ATACCGCCGT GCTGCGCAAA
GACGGCTCCG GTCCGTTCAT CTCCTTCCGC TCCGTCAGGG CGGCACCGGA TATCACCACC
ATATTCTACC GGGCGCCGGT CATCCGCTAT ATATCCATCG ACCGGCTGGC GGTGTCTCTC
GAATTCATGG GCAAGGGGCA ATACAACTTC TCCGACCTTA TGCCTCCTTC CGCCGAAGCC
CGGCCGGAAG ACAGCGGGCA GGACGACGCG GTATTTCCTT TTGCCGTACG CAATTTCATG
CTGACAAACA GCTCCATCGT CTTCCGTGAC ACGCCCCACG GCATCACCCA CACCGTGACG
GACCTCAATC TGCAGGTACC GTTCACCTCC AGTCTGGCCG GAGACAGGGA CGCTCCCGTG
GAACCGCGTA TGAACGCCAC CGTCAACGGC AATGCCGTCG ACTTCGAGGG GCGCATAGTT
CCTTTCGGCA ACAAACTGCG CACCGACTTC ATCTTTGCCG CAGACAACAT CGAACTGAAG
GATTACTGGC AGTATATTCC CGCCGGAATT CCGCTGGAAC TCGCCAGCGG ACGGCTTTCA
ACCGCTGTCA ATTTCTCTTT CGCCGAACAG GCTTCGGGTT CGCTGCTGCA TATCAGCGGC
AACGGCACAC TGGCCGATGT GGCTTTGTAC GACGGCAAAA AGAAAGTCCT TGGTTTTGAT
GCATTCTCAT ACGACATCGG CAGGTTTTCC CTGTTTGAAC AGCTGCTGCA CGTCCGCAGC
GCCGTACTGA CAAAACCTTT TGCGGACATC ACGCGCAGCG CGTCGGGGCA GCTGAACTGG
CAACGCTATG CGGCGGCGCT GCTCACTCCT CCTGCTGCCG CGCAGGAAAA CATGGCGCCG
GTGCAACGTT CAGCAGCTGC CGCAAACGCC ACCGTGCCGA AAAACACAGA CGGACAGACC
GCAAAGCAGG CAGACGGCTT CGGCTTCAGC ATACAGCTTG ATGCGGCATC GGTTACCGGC
GGTTCGGTGG CCCTGCATGA CAACATGGTC GAAGGCGGCT TCAACCACAC CTTCGGCCCG
CTGGACATAA CACTGAACAA TCTGAGCACA ACCGGCGGCA AAGGCTCTGT GGGCATCTCT
ATGCAGGGAG CCGGAACCGC CGCGCTGAAA GGCACTCTGG GACTGAACCC CCTGAGCGGC
GAGATACAGG CATCTCTGAA CAACACCGAC CTGCGTCTGT TCACCCCGTA TATACATCAG
GCACAGCCCC TGCTGCTGGA CAGCGGCAGG CTGAGTGCCC GTGCCCGCGC TTCATTCAGC
GCGGGCGCAA CCCTGAACGC CACCGTGCAG GATGCGGGGA TTACCCTTTC TGCACTGGAA
CTGCGCAAAC AGGGCAATAA AACACCGAGC ATCCGCATAC CCGAACTGAC CGTTTCCGGC
GTGCAGATAC GTCCGGACAG CCGTCAGGCA CAGGTGGCGG ATATCACGCT GCGCGACGGC
TTTGTCCGCA TGGTGCGGGA AAAAAGCGGC AGTATGGACC TGCAACGGCT GTTTACAGAA
CACAGCACGG CCGGAACGGC AGAGGACACC GCCCCGCAGG AAAACGACGG CAGTCCGTGG
TCGTTCACCG TGCAAAAGGC CGCACTGCAA AACAGCGAAT GTGTGCTGCT GGATGAAACC
CTGCCCCGCG CCGCACGGCT GACGGTCACC GGCATCAATC TGGATGTGAC GGGTGCCGGC
AGCGATGCCG CCGCGCCGGT GGAGTTCAGT TTTTCCGGCA ACTGGCTGCC GCACGGCAGG
CTTGCCGCAG AAGGTTCCCT GACCCGCGAC CCGCTGCGTG CCGACGTACG CTCCTCCACC
CGCAACATGT CGCTGGCGGC CTTTGATCCG TACCTTGCAG CCGTCACCGA CATGGTGCTG
GCCAAAGGCG GTGTGGACAG CGACCTGCGC GTTTCCGTGC GGGGCAACGG CATGCAGGGC
ATCCGTGCCG GCGGCAGCGT GGCAGTAAGA GATGTACTGG TACGCGACGC CATGCACAAA
GACGGCATCG CATCGCTGGG CAGTCTGGCC GTCAACGGCA TCGCCTTTGA CGGCGCGGCC
GAAACTCTTT CCGCAGAGAC CGTGCGCCTT GAAAAGCCGA AACTGGATAT CCTGCGGGAA
CAGGACGGCA TGCTGAACCT GCAGCGGGTA CTGCGTGCCG GACCCGTGCA GGTCAACGCC
ACCGCCGTGG CAGACGCCAC CGTTACCGCA GACGTAACCG GCATTCCGGA AGAAGAATCA
GTGCTGCCGC AAACCGGTGC AGACGGTGAT GTGCAGATGC GTGTGGCCGT CAATGCCACC
ATGCCCGGAG CACCGGCATC AGACAAAGAC AGCGCATCCC CTGCCGGTCT GGAAAAGCAC
TTTTCAGACG TACGGCTGGG CGGCGCCTTC ATCAGCGACG GCACGGTGCA TTTCCGCGAC
GTCTCTGTTT CGCCGCCCTT TGAACTGACA CTGGCCGGGC TCAATGCCAC CCTCTCGTCA
GTTTCCCTTT CCGCGGCTTC ACGCCCCGAC CTGAGGGTCG ACGGCAGGCT GAACGGTGTT
CCGCTGACAC TGCAGGGAGC GCTCAACCCG CTGGTTTCAC CACCGTATTC CGATCTGGCC
CTGCGCATAG CCAACCTCGA CCTTGTGGCG TTTTCGCCGT ACTCGCTGCA GGGCATCGCC
TATCCCGTCA AACGGGGCAG GCTGGATGTC GAATCACGCT TTAAAACCGA GGACTGGCTG
CTTACATCCG ACACCCGGCT GCATGTGGCA CGGCTGGCGC TGGGAGAAAA AGACAGACGC
CCCGACGCCC CCAATTACCC TGTGGAGCTG GGTATAGCCC TGCTGCGCGG CCCCGGAGGC
GACATCGACA TTTCGCTGCC GGTCCGCGGC CGGCTGGACG ACCCCAACTT CCGGGTGGGC
GGCATAGTGC TGCAGGCCGT GGTGAATCTG GTCATGAAGG CCATGACATC GCCCTTTGCG
CTTATAGGCG GACTCTTCGG CGGCGGAGAA GATCTGGACT TTGTGGCAAT GTCTGCCGGA
AGCACCGCAC TGGATGCCGC GGCAGAGCAG AAAATATCAT CCATCGCCAC CGCACTGGCC
GAAAGGCCGG GACTGGAGCT GGAAATACAG GGGCTGGCCG ACGCCGTACG CGACAGGCAG
GCGCTGGAAA AAGCCGCCTT TGACCTGCGC ATAAAAACCC GCAAATATCT GGACCTGCCG
CGCAGCGAAA GGGCGGCGAC GTCTCCCGCG GAAGTCATGG TGACCGCCGA GGAATATCCT
GAATATCTGC GCTCCGCATA CGAAGAAGAG CCTTCCGACG ACCCTGAAGC CAAACCCACA
GGGCTCTTCG GCATCGTAAA AGACCAGCCG GTTGAATTCA TGGAGGCTTT TCTGCGCCGC
AGCACCGCCG TAAGCGATGC AGACCTCGGC GCTTTTGCAC TGGAACGGGC CAGAGCCGTG
CGTCAGGCCA TCCTTGCCCT CCGTCCCGAT GTGGCCGGCA GGCTGCTGCT GGTACAGCCT
GATATCACCG GCAGACAGGG CGGAAAAGCC GCACAGAAAC CCGGAGTTTC GCTGACCTTG
CGCTAG
 
Protein sequence
MNLSQRWNTL PRKAKLAILW LAGLLAVWTA GGFFLVPHIA RDAVESNLSQ ALGRNCSVGG 
MSFNPFTLSV ELRDTAVLRK DGSGPFISFR SVRAAPDITT IFYRAPVIRY ISIDRLAVSL
EFMGKGQYNF SDLMPPSAEA RPEDSGQDDA VFPFAVRNFM LTNSSIVFRD TPHGITHTVT
DLNLQVPFTS SLAGDRDAPV EPRMNATVNG NAVDFEGRIV PFGNKLRTDF IFAADNIELK
DYWQYIPAGI PLELASGRLS TAVNFSFAEQ ASGSLLHISG NGTLADVALY DGKKKVLGFD
AFSYDIGRFS LFEQLLHVRS AVLTKPFADI TRSASGQLNW QRYAAALLTP PAAAQENMAP
VQRSAAAANA TVPKNTDGQT AKQADGFGFS IQLDAASVTG GSVALHDNMV EGGFNHTFGP
LDITLNNLST TGGKGSVGIS MQGAGTAALK GTLGLNPLSG EIQASLNNTD LRLFTPYIHQ
AQPLLLDSGR LSARARASFS AGATLNATVQ DAGITLSALE LRKQGNKTPS IRIPELTVSG
VQIRPDSRQA QVADITLRDG FVRMVREKSG SMDLQRLFTE HSTAGTAEDT APQENDGSPW
SFTVQKAALQ NSECVLLDET LPRAARLTVT GINLDVTGAG SDAAAPVEFS FSGNWLPHGR
LAAEGSLTRD PLRADVRSST RNMSLAAFDP YLAAVTDMVL AKGGVDSDLR VSVRGNGMQG
IRAGGSVAVR DVLVRDAMHK DGIASLGSLA VNGIAFDGAA ETLSAETVRL EKPKLDILRE
QDGMLNLQRV LRAGPVQVNA TAVADATVTA DVTGIPEEES VLPQTGADGD VQMRVAVNAT
MPGAPASDKD SASPAGLEKH FSDVRLGGAF ISDGTVHFRD VSVSPPFELT LAGLNATLSS
VSLSAASRPD LRVDGRLNGV PLTLQGALNP LVSPPYSDLA LRIANLDLVA FSPYSLQGIA
YPVKRGRLDV ESRFKTEDWL LTSDTRLHVA RLALGEKDRR PDAPNYPVEL GIALLRGPGG
DIDISLPVRG RLDDPNFRVG GIVLQAVVNL VMKAMTSPFA LIGGLFGGGE DLDFVAMSAG
STALDAAAEQ KISSIATALA ERPGLELEIQ GLADAVRDRQ ALEKAAFDLR IKTRKYLDLP
RSERAATSPA EVMVTAEEYP EYLRSAYEEE PSDDPEAKPT GLFGIVKDQP VEFMEAFLRR
STAVSDADLG AFALERARAV RQAILALRPD VAGRLLLVQP DITGRQGGKA AQKPGVSLTL
R