| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0211 |
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| Symbol | |
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| ID | 3755325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 191079 |
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| End bp | 192995 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637781071 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_386707 |
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| Protein GI | 78355258 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATAT ACGGACACCC CTTTTTACTT CCGGCACAGG CCGCCGCTGC CTGCCTGACC
CTGCTGGCAG CCGCGCCCGC GGTACCGGCC GCTCAGCGCA CTGCGGACGT AATGGCCGGC
ACATGGACAT ACGGCGGCAG GCCCTACATG CTGCTGCTGG GCATACTGGT TGTCGTATCC
GCCGGTATGG CGGTTACCGG CATGGTCCGG GCCAGAAATG CCGCCCGCCG CGCTGCGCAG
ATGGAAAAAC TGCTCCGCCA GCGGCTGGGA GAAACAACCG AATGGGCCGA CAGAGAACGC
GAAATACGGA CGCTCATGCA CCATGCCGCC ATCGGCATCT ACCGTTCAAC GCTTGACGGT
TCGCGCTTTA CCGAAGCCAA CAAGCATCTT GCGCTGCTGT ACGGCATGCA TGATGAAAAA
GAATTTCTGC GCACCGTCAC GCCGCTGGAT ATGCACCCGT CGGGACAAAA CCGGCAGGAA
CTCATGCAGA AGCTGCGCCG CGACGGCGTG GTCAGCAGGC AGAAAATCCT GCTGCGCGAC
AAATCAGGCA GTCTGCGGCA CGCCATCACG TCCGCGCTCA TAAGTTCCCG CAATGAAAGC
ATCTTCGGGC TTATTTATGA CATGACGGAC GAACACAACA GCAAAGAGGA AATGCGCCGC
ACCGGCGCCA TGCTGCAGTC GGTCATTGAT GCCATGCCCA ACCCGTTCTT TTTTAAAAAT
GCCCGGGGCC GCTATAAGAT TGTGAACCGC GCCTTCTGCC GGCTTGTGAA CCGCCCTGCC
GAAGCGCTGG TGGACCGTAC GGTCGAAGCA TTCGCCTCGC CCGCCATGGC ACAGATATAC
AACGATGCCG ACGCAGTGCT GCTGACAGCG GCAGGCCCCG CCGTGCAGCG CTATGAAACC
GTTGTCGAAT CGGAAGAAGG CGGCACTGAG GTGCTGCTGT ACAAAGAAAG CATATGCGAC
GATAACGGAA CCATCACGGG CATAGTGGGC GCAGCGTTTG ACATCACATC GCGCAAGGAA
ACCGAATCGG CCCTGCGGCA GGCGGAAGAG CGGTACCGCA CCATTTTCAT GCATGCTCTG
GACGGCATTT TCACCTGCAC GCCGCAAGGT CTCCTGCTGG AAGCCAACCC CGCTTTTGCG
CGCATGTTCG GTTACGAAAG CCGTGAAACC CTGCTGGAAA CCGTTCCGTC CGTCCGCTCG
CTGTGGGTCA GCAGCCAGAC ACACGACGAA ATGATGGGCC TTTTATGCAA CCGGCCGCAA
CTCACGGCGC AGCGTGCCGA GATGCTGCGC CGCAACGGCG AACACTTCTG GGCGGAAATA
AGCTGTCAGG CCTTTTATGA CACGCAGGGC GAAGTGACAC GCATAGAGGG CATCATCTCT
GACGTGACGC ACCATATGAT GCAGGAACGT GAGCTGCGGA CACAGGCTTC CACGGACAAA
CTGACCGGCC TCATGAACCG TTACGGCTTT GATGAAGCCT TTGAGCGGCT GCTGGCGCAG
GCGCAGCGCA GTTCGCGCAA GGTGGGCGTG GCGTTCATTG ATCTGGACGG GTTCAAGGAG
ATCAATGACA GATTCGGCCA CGACACAGGA GACATGCTGT TGAAAGAGGT GGCACGCAGA
CTGCAGCAAC GCGTGCGCGA AACCGATATA ACGGCCAGAC CGGGCGGTGA CGAGTTTGCC
GTGCTGTTGT GGGATGTGGG CGGAACCGAA GACCTGCGGC GGCTGGGGGA AAGCCTGCTG
GACGCGCTGC GTCCGCCCTA CCGCTGCGAT GCAAATGTCT GTACGCTGAC AGCCAGCATA
GGGCTGAGCC TGTACCCCGA CCACGGGCTG ACCGCAGGAA CCCTGCTGCG GCAGGCTGAC
CAGGCCATGT ATGCGGTAAA AAACGCCGGA AAAAACGCTG TCCGGCTGGC TGTGTGA
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| Protein sequence | MSIYGHPFLL PAQAAAACLT LLAAAPAVPA AQRTADVMAG TWTYGGRPYM LLLGILVVVS
AGMAVTGMVR ARNAARRAAQ MEKLLRQRLG ETTEWADRER EIRTLMHHAA IGIYRSTLDG
SRFTEANKHL ALLYGMHDEK EFLRTVTPLD MHPSGQNRQE LMQKLRRDGV VSRQKILLRD
KSGSLRHAIT SALISSRNES IFGLIYDMTD EHNSKEEMRR TGAMLQSVID AMPNPFFFKN
ARGRYKIVNR AFCRLVNRPA EALVDRTVEA FASPAMAQIY NDADAVLLTA AGPAVQRYET
VVESEEGGTE VLLYKESICD DNGTITGIVG AAFDITSRKE TESALRQAEE RYRTIFMHAL
DGIFTCTPQG LLLEANPAFA RMFGYESRET LLETVPSVRS LWVSSQTHDE MMGLLCNRPQ
LTAQRAEMLR RNGEHFWAEI SCQAFYDTQG EVTRIEGIIS DVTHHMMQER ELRTQASTDK
LTGLMNRYGF DEAFERLLAQ AQRSSRKVGV AFIDLDGFKE INDRFGHDTG DMLLKEVARR
LQQRVRETDI TARPGGDEFA VLLWDVGGTE DLRRLGESLL DALRPPYRCD ANVCTLTASI
GLSLYPDHGL TAGTLLRQAD QAMYAVKNAG KNAVRLAV
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