| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0208 |
|---|
| Symbol | |
|---|
| ID | 3755322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 186600 |
|---|
| End bp | 188309 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637781068 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_386704 |
|---|
| Protein GI | 78355255 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1757] Na+/H+ antiporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTCGT TTCTTACAGG CATTCCGGCG TCGCTTGCGG GGTTGCTGCT GTGCAGCATA
CCGGCGTTGG CCGCGGATGC CAGCCTGGGC CCCGTCAATG CCGAACGGTT CGGCATCTGG
ACGCTTATCC CGCCCGTTGT GGCCATCCTG CTGGCCTTCA TCACGCGCAA CGTGGTGCTT
TCGCTGTTTA TCGGTGTTTT CTCCGGCGCA TTCATGCTGG AATCAAAAGG CTTTGACCTG
TACTCCGGCA TGGTGGACGG TTTTCTGCGT CTGTCGGGCG AAATTCTGAC CTCGCTGGCC
GACCCGTGGA ACGCGGGCAT CGTGCTGCAG GTGCTGGCCA TCGGCGGCCT TATTGCACTG
GTTTCGCGCA TGGGCGGCGC AAAGGCCATT GCAGAGGCAC TGGCACGCAA AGCCAGAAAT
GCCAAAAGCG CACAGATGTC CACATTTCTC ATGGGCATAG TCATTTTCTT TGACGATTAC
GCCAACTCGC TGACCGTGGG CCCCATCATG CGCCCCGTCA CCGACAAAAT GAAAGTTTCC
CGCGAAAAAC TGGCGTTCAT CATCGATGCC ACTGCCGCCC CCATTGCCGG GATGGCGCTC
ATATCCACAT GGGTGGCCTA CGAAATAGGC CTCATCAAAG ACGGGTTCGA CGCCATCGGC
CTGCAGGGCA ACGCCTACGG CACCTTTGTG GAAACGCTGC CTTTCCGTTT TTACAATATT
TTCATGCTGG TATTTGTGGT GGCGGGCATC TGGCTGCTGC GCGAATTCGG CCCCATGCTG
AAAGCCGAAC AGCGTGCGCG CACCACCGGC AAGGTGCTGG ACGACAACGC CAAGCCCATG
GTTGCCGACG AGGCAACCGA CCTTGAGCCG GACCCGGACA CCCCGCTGAG CATCTGGAAC
GCCATCATCC CCATCGGGGT GCTTATCGTC GCGGCGTTTC TGGGCTTCTA CTTCAACGGT
TACAACGCCA TCATGGCAGG CGACAACGCA GCCCTCATTG CTTCCGTGAA GGAATCGCCC
ATGGGCTTTG CCTCGCTGCG TGACTGCTTC GGCGCCTCCG ACGCATCGGT GGTGCTTTTT
CAGGCTGCGC TGCTGGCAGG CATTGTGGCC ATCACCATGG GGGTCAGCCG TCGCATCTTC
ACGCTGGAAG AAGCTCTTTC CACATGGGTT CAGGGCATCA AATCGCTCAG CATCACCGCC
GTCATCCTGC TGCTGGCGTG GTCGCTTTCC GGCATGATCA AAGAACTGGG CACGGCACGC
TATCTGGTGA CCGTTCTTTC CGATGCGCTG CCGCCCTTCC TGCTGCCCAG CATCATCTTC
ATCCTCGGTT CGTGCATCTC GTTCGCCACC GGTACATCTT ACGGCACCAT GGGCATACTC
ATGCCGCTGG CCATTCCGCT GGCATGGGCC ATCACGCCGG AACACAACTA TCTTATCATG
AACATCGGGG CCGTGCTTAC GGGGGCCATT TTCGGCGACC ACTGCTCGCC CATTTCAGAC
ACCACCATTC TGTCTTCCAT GGGGGCCGCG TGCGACCACA TCGACCACAC GCGCACACAG
CTTGTCTATG CCCTTACCGT GGGAGCCTGT GCGGTGCTGT TCGGTTACCT GCCCGCGGGC
CTCGGCCTGC CGGTGCTGCT GGTGCTGCCT CTGGGTATCG CATCCGTGTT CATCATGACC
CGTCTTCTGG GCACCCGCCT GCCGGAATAA
|
|---|
| Protein sequence | MRSFLTGIPA SLAGLLLCSI PALAADASLG PVNAERFGIW TLIPPVVAIL LAFITRNVVL
SLFIGVFSGA FMLESKGFDL YSGMVDGFLR LSGEILTSLA DPWNAGIVLQ VLAIGGLIAL
VSRMGGAKAI AEALARKARN AKSAQMSTFL MGIVIFFDDY ANSLTVGPIM RPVTDKMKVS
REKLAFIIDA TAAPIAGMAL ISTWVAYEIG LIKDGFDAIG LQGNAYGTFV ETLPFRFYNI
FMLVFVVAGI WLLREFGPML KAEQRARTTG KVLDDNAKPM VADEATDLEP DPDTPLSIWN
AIIPIGVLIV AAFLGFYFNG YNAIMAGDNA ALIASVKESP MGFASLRDCF GASDASVVLF
QAALLAGIVA ITMGVSRRIF TLEEALSTWV QGIKSLSITA VILLLAWSLS GMIKELGTAR
YLVTVLSDAL PPFLLPSIIF ILGSCISFAT GTSYGTMGIL MPLAIPLAWA ITPEHNYLIM
NIGAVLTGAI FGDHCSPISD TTILSSMGAA CDHIDHTRTQ LVYALTVGAC AVLFGYLPAG
LGLPVLLVLP LGIASVFIMT RLLGTRLPE
|
|---|
| |