Gene Dde_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0187 
Symbol 
ID3756598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp172719 
End bp173291 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content57% 
IMG OID637781046 
Productflavoredoxin 
Protein accessionYP_386683 
Protein GI78355234 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.871882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT CGTTCGGCGC AAAGACGCTT GCATATCCTG CTCCGCTTTT CTGCGTGGGC 
ACCTATGACG CGCAGGACCG CCCCAATATC ATGGCTGCGG CATGGGCAGG CATCTGCTGC
TCAAAGCCGC CCAGTCTTGC CGTTTCGCTG CGTCCCGCAA CCTACTCGCA CGGCGCCATT
CTGGCCCGCA GGGCGTTCAC CGTGTCCATA CCTTCCTCGG CGTATATGGC TCATGCCGAT
TATGCGGGCA TGGTCAGCGG CGAGACCGAA AACAAGTTTG AAACGCTGGG GCTGACTCCC
GAAAAAGGCG GATTTGTGGA TGCACCCTAT GTGGCGGAGT TTCCTCTGGT CATCGAGTGC
GCACTGACTC ATTCGCACAG CATCGGTCTG CATACCCAGT TCATAGGCGA AATACTGGAC
GTCAAAGTGG ATGAAACCTG CCTGGGCGAA GACGGTCTGC CTGATATCCG CAAGGTTGAT
CCGGTCATTT TTGCACCGGT GACGCGCGGC TACTATGCCG TGGGCGAGTA TCTGGGACAG
GCTTTCAGCG CCGGCAAGAC GCTGAAAAAA TAG
 
Protein sequence
MKKSFGAKTL AYPAPLFCVG TYDAQDRPNI MAAAWAGICC SKPPSLAVSL RPATYSHGAI 
LARRAFTVSI PSSAYMAHAD YAGMVSGETE NKFETLGLTP EKGGFVDAPY VAEFPLVIEC
ALTHSHSIGL HTQFIGEILD VKVDETCLGE DGLPDIRKVD PVIFAPVTRG YYAVGEYLGQ
AFSAGKTLKK