Gene Dde_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0177 
Symbol 
ID3755348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp162987 
End bp163877 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content65% 
IMG OID637781036 
ProductDNA polymerase III, delta prime subunit, putative 
Protein accessionYP_386673 
Protein GI78355224 
COG category[L] Replication, recombination and repair 
COG ID[COG0470] ATPase involved in DNA replication 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGCTC AGGGTGAAAC GCTCTGTGCG CCGCATGCCT CTGATATCAT AGCCCCGGCC 
CTGTCGTCGC GTCACGACAG GGTGCGGGGC TATCTTGAGC GGCTTGCTGG CTCTGTGCCG
CAGGTGCTGC TGCTGGAAGG CGGCACCCCC CGCGAACGCG AGGCCGTGGC GCTGTGGTGG
GCCGCGCGTC TCAACTGCGC GGGGACCGGT GCGCCCTGCC TTTCCTGCGC TGTCTGCACC
CAGTTTGCCA CGCGCAACAA CCGCGATATG TTTTATCTGG ACGGTGCGCA GGGTTCCATC
AAGATTGATG ATGTGCGCGC CGTGCGTGCC GTGCTGGGCG AACCGCCCAG AGGCCGCTAC
CGTGTGGTTG TGCTGGCCGA GGCTCAGTCG CTGGGCATAG AGGCCGCCAA TGCCCTTCTT
AAATCGCTGG AAGAACCCCG TCCCGGAACC AGTTTTGTTC TGCTGGCTCC GCAGCGTGAA
CGTCTGCTGC CAACTCTTGT TTCCCGCAGC TGGGTGCTGA CTCTGGCCTG GCCGGACGGC
GGCGCCTGCG ACCCTGCCGT GCAGGAATGG GCCGATGCCC TTGCCGGTTT TGTGTCAGGC
GAAGAGGGCT GGTTTGCCCG TACCGGTGCC AAGGGCAGCA TCGATCAGGG AACTGCGTTG
CAGCTGGTGG CATTTCTGCA GCGCCAGCTT GCCCTGGCTC TCACCGGCCG CGGGGCGTCT
TCGTTTGCCC GCCTGCTTGT CTCGCGCCTT GATACCGCCG CCATGCGCCG TCTGGATGAA
GCGCTGGCGG AGTGTCAGGA CTCTCTCATT TACAATGTGA ATCCCGCTCT TGTCCTTGAC
TGGCTGGCAA CGCGCCTTTT CGCATGGGCG CGTACGTCCC GCCGCGCTTG A
 
Protein sequence
MSAQGETLCA PHASDIIAPA LSSRHDRVRG YLERLAGSVP QVLLLEGGTP REREAVALWW 
AARLNCAGTG APCLSCAVCT QFATRNNRDM FYLDGAQGSI KIDDVRAVRA VLGEPPRGRY
RVVVLAEAQS LGIEAANALL KSLEEPRPGT SFVLLAPQRE RLLPTLVSRS WVLTLAWPDG
GACDPAVQEW ADALAGFVSG EEGWFARTGA KGSIDQGTAL QLVAFLQRQL ALALTGRGAS
SFARLLVSRL DTAAMRRLDE ALAECQDSLI YNVNPALVLD WLATRLFAWA RTSRRA