Gene Dde_0150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0150 
Symbol 
ID3755301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp137366 
End bp137935 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content61% 
IMG OID637781009 
Product3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein accessionYP_386646 
Protein GI78355197 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAT TTATTGTAGG CGTTTCCGGC GCAAGTGGCA TGCCGCTTGC CGTGACGTTG 
CTAAATGCCC TCACATGGGC CGCGGATGTG GAAACACATC TTGTGGTGTC GCGTGCGGCG
GAAAAGGTGC TCACGCTGGA ATCGGGAATT TCCGTTGACC AGTTGTATGC TCTTGCCGAT
GTGCGGCACG ACCCCGAAGA TGTGGGCGCC GCCCCCGCCA GCGGTTCATG GCGGCATTCC
GGCATGGTTA TCTGTCCGTG CAGCATGACC ACGCTTGCCG CGGTAGCCAA CGGCATAGGG
TCCAACCTTA TTCACCGTGC GGCGGATGTG ACGCTGAAGG AAAACAGGCC GCTGATTCTG
GTGCCGCGCG AGACGCCGCT TGGCAGAGTG CATCTGCGCA ACATGCTGGC CGCGCAGGAA
GCCGGGGCGG TTATCATGCC GCCGTGTCCG GGGTTTTACA GCCGGCCCGA AAGCATACAG
GACATACTGA ATCATCTTGT GGGCAGGATG CTTGATCATC TGGGCATCGA GCACGACCTG
TGCCGCCGCT GGGGCGGTTT GCCGGCCTGA
 
Protein sequence
MKRFIVGVSG ASGMPLAVTL LNALTWAADV ETHLVVSRAA EKVLTLESGI SVDQLYALAD 
VRHDPEDVGA APASGSWRHS GMVICPCSMT TLAAVANGIG SNLIHRAADV TLKENRPLIL
VPRETPLGRV HLRNMLAAQE AGAVIMPPCP GFYSRPESIQ DILNHLVGRM LDHLGIEHDL
CRRWGGLPA