Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0132 |
Symbol | |
ID | 3756580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 123239 |
End bp | 124447 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637780990 |
Product | permease, putative |
Protein accession | YP_386628 |
Protein GI | 78355179 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000112317 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGAAC TTTTAGCCCG CTACGCATTC GCCGTATGGG ACATCCTGCT GGACGCATCA CCCTATGTGC TGCTGGGTTT TTTTGTGGCC GGTCTGCTTA AAGCTTATCT GCCAGAAGAT CTGGTGGCGC GCCATCTGGG AAAAGGGCGC TTTCTTCCGG TGCTCAAAGC GTCGCTTTTC GGGGTGCCTC TGCCTTTATG CTCATGCGGA GTTATTCCCG CCGCTGCCGG GCTGCGCCAG CAGGGAGCAA GCCGCGGCGC CACCACATCG TTTCTGATTT CCACGCCGGA AACCGGCGTT GACTCCATAG CCGTCAGCTA CGCACTGCTG GACCCCGTCA TGGCGGTTGT CCGGCCGGTG GCCTCGTTTT TCACGGCCAT CATCGCCGGA GTGGCGGTAA ACAGCCTGCC GGAGGAAGAA TCCCCTCAGG CGGCTTCATC AGCGGCCGCT GCCACCGCAG CGGCACATCA GGGCTGCAGC TGCGGCCCGC ATGCCGGAAC AGAACACACT CACGGTATTA TGCCCGCACC GGTTGTGCTT CCCGCCGCGG AGCACGCAGC ATCTGCGGGT TGCGGCTGCG GGTCGTGCGG ACATGACGGC CCCGCCCCCC GCACCATGCG GGAAAAATTC GTCAGCGGCA TGCGGTTCGG CTTCGGCGAA CTGGTTGCGG ACATCGGCAA ATGGCTCATG GTGGGTATTC TGCTGGCTGC CGTCATCACC ACGCTTATTC CCGACACATT TTTTGCCAGC TATCTTGGTG ACGGCCTTAT GAGCATGCTG GTCATGCTGG TGGTGGGTAT GCCCCTGTAT GTCTGCGCCA CCGCCTCAAC CCCCGTGGCT GCGGCCATGG CCGTCAAAGG ACTTTCACCC GGTGCCGCGC TGGTCTTTCT GCTGGCAGGG CCGGCGACCA ACGCGGCGAC TTTCACGGTC GTTGCCAGAC TGATGGGCCG CAAGGTTGCC GCCGTGTATC TGGCCAGCAT CGCGGTATGT TCCATTGCAC TCGGTCTGGC GGTAAACTGG CTGTATGCCT ATCTGGGACT CAGCATCACT TCATGGGTGG GGGCCGCACA AGAAGAATCA CACGGCGTTA TCGCCATTGC TTCCGCGGTG GTGTTGCTGG GGCTGGTGGC CTACCGCACC CTGCCCGGAA TCATCCGGCG GGGGCACAAC GCGCACGGGC ACAGCCACGG GTGCTCATGC GGGCACTAG
|
Protein sequence | MSELLARYAF AVWDILLDAS PYVLLGFFVA GLLKAYLPED LVARHLGKGR FLPVLKASLF GVPLPLCSCG VIPAAAGLRQ QGASRGATTS FLISTPETGV DSIAVSYALL DPVMAVVRPV ASFFTAIIAG VAVNSLPEEE SPQAASSAAA ATAAAHQGCS CGPHAGTEHT HGIMPAPVVL PAAEHAASAG CGCGSCGHDG PAPRTMREKF VSGMRFGFGE LVADIGKWLM VGILLAAVIT TLIPDTFFAS YLGDGLMSML VMLVVGMPLY VCATASTPVA AAMAVKGLSP GAALVFLLAG PATNAATFTV VARLMGRKVA AVYLASIAVC SIALGLAVNW LYAYLGLSIT SWVGAAQEES HGVIAIASAV VLLGLVAYRT LPGIIRRGHN AHGHSHGCSC GH
|
| |