Gene Dde_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0132 
Symbol 
ID3756580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp123239 
End bp124447 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content62% 
IMG OID637780990 
Productpermease, putative 
Protein accessionYP_386628 
Protein GI78355179 
COG category[R] General function prediction only 
COG ID[COG0701] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000112317 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAC TTTTAGCCCG CTACGCATTC GCCGTATGGG ACATCCTGCT GGACGCATCA 
CCCTATGTGC TGCTGGGTTT TTTTGTGGCC GGTCTGCTTA AAGCTTATCT GCCAGAAGAT
CTGGTGGCGC GCCATCTGGG AAAAGGGCGC TTTCTTCCGG TGCTCAAAGC GTCGCTTTTC
GGGGTGCCTC TGCCTTTATG CTCATGCGGA GTTATTCCCG CCGCTGCCGG GCTGCGCCAG
CAGGGAGCAA GCCGCGGCGC CACCACATCG TTTCTGATTT CCACGCCGGA AACCGGCGTT
GACTCCATAG CCGTCAGCTA CGCACTGCTG GACCCCGTCA TGGCGGTTGT CCGGCCGGTG
GCCTCGTTTT TCACGGCCAT CATCGCCGGA GTGGCGGTAA ACAGCCTGCC GGAGGAAGAA
TCCCCTCAGG CGGCTTCATC AGCGGCCGCT GCCACCGCAG CGGCACATCA GGGCTGCAGC
TGCGGCCCGC ATGCCGGAAC AGAACACACT CACGGTATTA TGCCCGCACC GGTTGTGCTT
CCCGCCGCGG AGCACGCAGC ATCTGCGGGT TGCGGCTGCG GGTCGTGCGG ACATGACGGC
CCCGCCCCCC GCACCATGCG GGAAAAATTC GTCAGCGGCA TGCGGTTCGG CTTCGGCGAA
CTGGTTGCGG ACATCGGCAA ATGGCTCATG GTGGGTATTC TGCTGGCTGC CGTCATCACC
ACGCTTATTC CCGACACATT TTTTGCCAGC TATCTTGGTG ACGGCCTTAT GAGCATGCTG
GTCATGCTGG TGGTGGGTAT GCCCCTGTAT GTCTGCGCCA CCGCCTCAAC CCCCGTGGCT
GCGGCCATGG CCGTCAAAGG ACTTTCACCC GGTGCCGCGC TGGTCTTTCT GCTGGCAGGG
CCGGCGACCA ACGCGGCGAC TTTCACGGTC GTTGCCAGAC TGATGGGCCG CAAGGTTGCC
GCCGTGTATC TGGCCAGCAT CGCGGTATGT TCCATTGCAC TCGGTCTGGC GGTAAACTGG
CTGTATGCCT ATCTGGGACT CAGCATCACT TCATGGGTGG GGGCCGCACA AGAAGAATCA
CACGGCGTTA TCGCCATTGC TTCCGCGGTG GTGTTGCTGG GGCTGGTGGC CTACCGCACC
CTGCCCGGAA TCATCCGGCG GGGGCACAAC GCGCACGGGC ACAGCCACGG GTGCTCATGC
GGGCACTAG
 
Protein sequence
MSELLARYAF AVWDILLDAS PYVLLGFFVA GLLKAYLPED LVARHLGKGR FLPVLKASLF 
GVPLPLCSCG VIPAAAGLRQ QGASRGATTS FLISTPETGV DSIAVSYALL DPVMAVVRPV
ASFFTAIIAG VAVNSLPEEE SPQAASSAAA ATAAAHQGCS CGPHAGTEHT HGIMPAPVVL
PAAEHAASAG CGCGSCGHDG PAPRTMREKF VSGMRFGFGE LVADIGKWLM VGILLAAVIT
TLIPDTFFAS YLGDGLMSML VMLVVGMPLY VCATASTPVA AAMAVKGLSP GAALVFLLAG
PATNAATFTV VARLMGRKVA AVYLASIAVC SIALGLAVNW LYAYLGLSIT SWVGAAQEES
HGVIAIASAV VLLGLVAYRT LPGIIRRGHN AHGHSHGCSC GH