| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0123 |
|---|
| Symbol | |
|---|
| ID | 3756441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 115815 |
|---|
| End bp | 116588 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637780981 |
|---|
| Product | 3'(2'),5'-bisphosphate nucleotidase |
|---|
| Protein accession | YP_386619 |
|---|
| Protein GI | 78355170 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
|---|
| TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA ACGTACCCCT GAGCGGGATG ATCCGCATAG CCAGACAGGC GGGAAAAGAA
ATCGCCGCCC GTCAGCAGGC CATTGTGCAG GCAGGTGAAG CCGCCATATG GCACAAGGAC
GACGACTCGC CCGTCACTCA GGCGGACAGG GCGGCCAGTG CCGTTCTGTG TGCCGGACTG
GCACAGATGG CTCCTTCTGT TCCCGTTATT TCAGAAGAGG AATCCATTCC CCCTGCCGAG
GTACGACGGG GCTGGGGGCT GTATTTTCTG GTGGACCCGC TGGACGGCAC CAAAGGCTAT
CTGAAAGGAG AGGCAGACTA CAGTGTCTGT GTGGCACTCA TGCGCCGCGA CATGCCTCTG
GCCGGAGTTG TCCATGTGCC TGCGCGCGGG CTTACCTATT ACGGTCTGCC CGGCACGGGC
GCATGGCGCG AAGATGAAAG CGGCATGCCG GTGCGCCTGC ATACCGCCCC CGCCGTTTCA
GGAAAACAAC CGGTGGTGCT GCAAAGCCGG GTGTCCGCAA CCCCCAAACT GGATGCCTAC
ATGGATGGTC TGCCCCATAC GCGCCTGATG GCAGGCAGTG CCTACAAGTT CTGCCTGCTG
GCCGAGGGAA CGGCCCAGAT GTATCCCTGT CTGCACCCCA CATGGGAATG GGACACCGCC
GCCGGAGAAG CCGTTCTGCG CGGAGCGGGC GGCACTGTGA CCGATATGGA CGGCCGCCCC
CTCAGATACG GCAAAAGCTC TCTGCTCAAC GATCTTTTCA TAGCGCGGGG ATGA
|
|---|
| Protein sequence | MFENVPLSGM IRIARQAGKE IAARQQAIVQ AGEAAIWHKD DDSPVTQADR AASAVLCAGL
AQMAPSVPVI SEEESIPPAE VRRGWGLYFL VDPLDGTKGY LKGEADYSVC VALMRRDMPL
AGVVHVPARG LTYYGLPGTG AWREDESGMP VRLHTAPAVS GKQPVVLQSR VSATPKLDAY
MDGLPHTRLM AGSAYKFCLL AEGTAQMYPC LHPTWEWDTA AGEAVLRGAG GTVTDMDGRP
LRYGKSSLLN DLFIARG
|
|---|
| |