| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0122 |
|---|
| Symbol | |
|---|
| ID | 3756440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 114525 |
|---|
| End bp | 115814 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637780980 |
|---|
| Product | NOL1/NOP2/sun family protein |
|---|
| Protein accession | YP_386618 |
|---|
| Protein GI | 78355169 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAT CCCCTCAGGC GCGGTCGTTC CGCGTAGTAT GTCCTGCCGG ACAGGAATCG
CTGGTTGAAG CCCTGCTGCA CAGTCAGGGA TACGAGTTTG AACCGGAGCC GGTATCGCCC
TGGACCCGCA GGCTTACAAA GGAGCCCAGA CCGCTGGGCA GCAGTCTGGC AGCTTTTTTC
GGACTGATTT ACATTCAGGA CAGATCTTCC ATGCTGCCGC CTCTGGCGCT GGCGCCGCAG
AACGGCGATG CCGTGCTGGA CATGTGTGCA AGTCCGGGCA GCAAAACGGG CTTTCTGGCG
CAGCTGGCAG GGCCGGACGG TTTTGTGATG GGTAACGAAC CCAACGCGCA GCGGCTGGCA
ACCCTGCGTC AGAATCTGTT CAACCTGAAC CTGCCGCATA CGGCCACCTG CGGCTACGCC
GGAGAATCCC TGCCCCTGCC GGATGCATCA TGGCAGAAAA TCCAGCTGGA CCCGCCATGC
AGCGGCTGGG GCACCGTGGA TAAAAACCCC AACGTGATGA AGCTGTGGCA GGGGGATAAA
GTCAAGCCGC TTGTGGGCAT CCAGCGGCTG CTGCTCAGAG AGGCTGCGCG GCTGCTGGCT
CCGGGCGGGG TTGTGGTTTA TTCCACCTGC ACGACCAACG TGCAGGAAAA TGAAGAACAG
GTGCGCTGGG CAACGCAGGA ACTGGGGCTG ATCCCCGAAC CGCTGGCACC GTTTGAAGGT
TTTGTTTTTG AAGACCCGCT GCTGCCGGGG TGCGAGGGAA CGCTGCGGGT GGATGCATCC
CGTTCATCGG CACAGGGATT TTATATCGCG CGTTTCCGCA AAGAGGGCGA TTCACCGCCG
CCTGAACCTG TTTCTGCCAT GCGGGTGCAG GGAATACACA GACAGGCATT GCGCGGACCG
TGTGCAGATC CGGACATGCT GCCGGACGGC GAGGTGGCTC TGTTCGGTTC CGCGGCCATG
TTTCTGCCGC AACAGGCCCT GAACTTGCTG CCCGAATCCT TCCGCTGGCG GGGATACCCG
CTAGGCAAGG CTTCGCGCGG CGAGGTGAGG GTCTCACCCC GGATGCGCTG CATGATGCCC
CCCGCAGATC AGTGCGCCGC AGGCGCGTTG AATGTGGAAG AGCCGGAACT GATAAGCGGC
CTGCTGTCCG GCCAGAGCAT TGATCTGGCC CGCGGTGCGT ATGCGGGCAG CGTGGATGCA
TCCCTGCCGG AGGCCGGACT GTATTTCAGA GGGCTGCCGC TGGGCAGGCT GCGTATCAAG
GGGCGCCGTG CCTTGTGGGC GGAGCGCTGA
|
|---|
| Protein sequence | MAESPQARSF RVVCPAGQES LVEALLHSQG YEFEPEPVSP WTRRLTKEPR PLGSSLAAFF
GLIYIQDRSS MLPPLALAPQ NGDAVLDMCA SPGSKTGFLA QLAGPDGFVM GNEPNAQRLA
TLRQNLFNLN LPHTATCGYA GESLPLPDAS WQKIQLDPPC SGWGTVDKNP NVMKLWQGDK
VKPLVGIQRL LLREAARLLA PGGVVVYSTC TTNVQENEEQ VRWATQELGL IPEPLAPFEG
FVFEDPLLPG CEGTLRVDAS RSSAQGFYIA RFRKEGDSPP PEPVSAMRVQ GIHRQALRGP
CADPDMLPDG EVALFGSAAM FLPQQALNLL PESFRWRGYP LGKASRGEVR VSPRMRCMMP
PADQCAAGAL NVEEPELISG LLSGQSIDLA RGAYAGSVDA SLPEAGLYFR GLPLGRLRIK
GRRALWAER
|
|---|
| |