| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0104 |
|---|
| Symbol | |
|---|
| ID | 3758846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 93668 |
|---|
| End bp | 95017 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637780962 |
|---|
| Product | L-glutamine synthetase |
|---|
| Protein accession | YP_386600 |
|---|
| Protein GI | 78355151 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACAA ACTATCCCGT CTTCAACTGC AAAAACGGCG ATGATGTCAT CAGAGCCGTG
AAGGACTACA ATGTCAGCTT TGTGCAGTTC TGGTTTGTGG ATATTCTGGG CAACCTCAAA
AGTTTTCAGG TAACCCCTGA CGAACTGGAA GCAGCCTTTG AAGAAGGAAT GGGGTTTGAC
GGCTCCTCAA TTCTCGGGTT CACCCGCATT GAAGAAAGCG ACATGATCGC GTTTCCTGAC
GCTTCAAGCT TTCAGATATG CTCGTGGCGT CCCATGGACC GCCCCGTGGC CCGCATGTTC
TGCGATATCC GCACGCCCGA CGGCAACCCC TACGAAGGCG ACCCCAGATA TGTGCTGCGC
AGGCTGGTGG ATAAGGCCGC ACAGAAGGGG TACACCTATT ATGTAGGCCC GGAACTGGAA
TTTTTCCTTT TCGCTGACTC CACATGCCCC AGACCTCTTG ATTCCGGAGG GTACTTTGAC
GCGCCCCCGC TGGATCTGGG CAATGAAGTG CGCCGTGACA TTATTTTTGC CCTGCAGAAA
ATGGGCATAG ATGTGGAATA CAGCCATCAT GAGGTGGCTC CTTCGCAGCA CGAAATAGAC
CTGCGGTACA ACGAAGCCCT GAAAATGGCT GATATAGCCA TGACCTACAA GGTTGTGGTC
AAAGAGATTG CCCGTAAACA CGGCGTGTAC GCCACGTTTA TGCCCAAGCC CATTTTCGGC
GAAAACGGCT CGGGCATGCA TGTGCACCAG TCTCTTTTCA AGAACGGTAA AAACGCTTTC
TTTGATGCCA ACGACCCGCA TCACCTGTCG GCCGAAGCCC GCCATTACAT CGCCGGTCTG
CTGACCCATG CCAGTGAGAT TACCTGCATC ACTAACCAGT GGGTGAACTC ATACAAGCGG
CTGGTGCCCG GATATGAGGC CCCGGTGTAT ATCGCGTGGG CGCAGCGCAA CCGTTCGTCG
CTTATCCGTG TGCCCATGTA CAAACCCGGA AAGGAAGCGG CAACCCGTAT CGAGCTGCGC
AACCCCGACC CCGCCTGCAA CCCGTACCTT GCCTTTGCCG CCATGCTGGG CGCAGGTCTG
GAAGGCATAG AAAAAGGGTA CGAAGTGCCG CGCGCGGTGG AAGAGAATAT CTTTGCCATG
GAGGCCGAAG ACCTGAGCGC CAAGGGCATT GATTCGCTGC CCGGTTCGCT GTACGAGGCC
GCGGTGGCCC TGCGGGACAG CGCCCTGATG AAAGAAGTGC TGGGCGAACA TACGCACCAG
AATCTTGTGG GCAACAAGCT CATTGAATGG GATGCCTACC GCACCCATGT TTCCGAGTTT
GAGCTTAAGC GGTATCTGCC GGTCCTGTAG
|
|---|
| Protein sequence | MSTNYPVFNC KNGDDVIRAV KDYNVSFVQF WFVDILGNLK SFQVTPDELE AAFEEGMGFD
GSSILGFTRI EESDMIAFPD ASSFQICSWR PMDRPVARMF CDIRTPDGNP YEGDPRYVLR
RLVDKAAQKG YTYYVGPELE FFLFADSTCP RPLDSGGYFD APPLDLGNEV RRDIIFALQK
MGIDVEYSHH EVAPSQHEID LRYNEALKMA DIAMTYKVVV KEIARKHGVY ATFMPKPIFG
ENGSGMHVHQ SLFKNGKNAF FDANDPHHLS AEARHYIAGL LTHASEITCI TNQWVNSYKR
LVPGYEAPVY IAWAQRNRSS LIRVPMYKPG KEAATRIELR NPDPACNPYL AFAAMLGAGL
EGIEKGYEVP RAVEENIFAM EAEDLSAKGI DSLPGSLYEA AVALRDSALM KEVLGEHTHQ
NLVGNKLIEW DAYRTHVSEF ELKRYLPVL
|
|---|
| |