Gene Dde_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0081 
Symbol 
ID3756452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp75821 
End bp77086 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content52% 
IMG OID637780939 
Productferredoxin hydrogenase 
Protein accessionYP_386577 
Protein GI78355128 
COG category[R] General function prediction only 
COG ID[COG4624] Iron only hydrogenase large subunit, C-terminal domain 
TIGRFAM ID[TIGR02512] hydrogenases, Fe-only 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTGG TTGAAATGGA AAAGATTCAG TATGTGGATC AGTCGCCTGA CCCGCGAGCG 
AATCCGGATG AACTTTTTTT CATCCAGATT GATCCGGAAA AATGTATCGG CTGCGATACC
TGTCAGGAGT ATTGCCCGAC GGGCGCCATA TTTGGCGATA CCGGGAGTGC GCATAGTATT
CCTCATGAAG AAATCTGCAT CAATTGCGGG CAGTGTCTTA CTCATTGCCC TGTCGGAGCC
ATTTACGAGG TGCAGTCCTG GGTTCGGGAG CTGAGTGAAA AAATCAAAGA TCCGGAGATC
AAGGTAATCG CCATGCCGGC TCCTGCTGTC CGGTATGGGC TTGGAGAATG TTTCGGCATG
CCGGTGGGCA CGGTAACCAC GGGAAAGATG CTGACAGCTT TGCAGATGCT GGGCTTTGAC
CACGTATGGG ACAATGAGTT CACCGCAGAT GTCACCATAT GGGAAGAAGG CACCGAGTTT
GTCAAACGCC TTACAGGGCA GATTGACAAG CCGCTTCCTC AGTTTACCTC TTGCTGCCCC
GGCTGGCACA AATATGTGGA AAGCTTTTAT CCTGAGTTGT TCCCGCATCT TTCAAGCTGC
AAATCTCCCA TCGGGATGAT GGGCGCACTG GCCAAAACGT ATGGACCGGA TGTGATGAAA
TATGATCGGT CCAAGGTTTA TACGGTTTCC ATTATGCCCT GTACCGCTAA AAAGTATGAG
GGCATGCGCG CGGACCTGTG GTCCAGCGGC TACAAAGACA TTGACGCAAC CATAGACACC
CGCGAACTGG CCTACATGAT AAAAAAGGCA GGCATTGATT TCGCCGCTCT GCCGGACGGC
AAACGGGACA CGTTGATGGG TGATTCCACC GGTGGGGCCA CGATTTTCGG TGTATCCGGC
GGTGTTATGG AAGCGGCTTT GCGTTATGCC TACGAGGCTG TGACCGGCAA AAAACCGTCG
AGCTGGGATT TTACGATGGT TCGCGGCCTG AACGGTATCA AAGAAGGTAC TGTCACCATT
GGCGATGCAA AGATAAACGT GGCGGTGGTT CACGGAGCAA AGCGTTTTGC GGAAGTATGC
GAGGTGATTA AGACAGGGAA AAGCCCGTGG CATTTCATCG AGTTTATGGC CTGCCCCGGA
GGATGTGTCT GCGGTGGCGG TCAGCCTGTG ATGCCCGGAG TACTGGAAGC TATGGACCGC
AAAGTTTCCA GAACCTTTGC CGGACTCAAA GAGCGTCTGA ACAGAATGTC GTCCAGCAAG
GCATAG
 
Protein sequence
MNLVEMEKIQ YVDQSPDPRA NPDELFFIQI DPEKCIGCDT CQEYCPTGAI FGDTGSAHSI 
PHEEICINCG QCLTHCPVGA IYEVQSWVRE LSEKIKDPEI KVIAMPAPAV RYGLGECFGM
PVGTVTTGKM LTALQMLGFD HVWDNEFTAD VTIWEEGTEF VKRLTGQIDK PLPQFTSCCP
GWHKYVESFY PELFPHLSSC KSPIGMMGAL AKTYGPDVMK YDRSKVYTVS IMPCTAKKYE
GMRADLWSSG YKDIDATIDT RELAYMIKKA GIDFAALPDG KRDTLMGDST GGATIFGVSG
GVMEAALRYA YEAVTGKKPS SWDFTMVRGL NGIKEGTVTI GDAKINVAVV HGAKRFAEVC
EVIKTGKSPW HFIEFMACPG GCVCGGGQPV MPGVLEAMDR KVSRTFAGLK ERLNRMSSSK
A