Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0065 |
Symbol | |
ID | 3755223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 55979 |
End bp | 56902 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637780918 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_386561 |
Protein GI | 78355112 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCCAGA AATCGGAAAC GATCTGGTTT GACGGCAAGC AGGTTGCATG GGACGATGCC AATGTGCACG TTTTGACCCA CACCCTGCAT TACGGTCTGG GCGTGTTCGA GGGAATCCGC GCCTATAAGT GTGTTGACGG CACTTCCGCC GTGTTCCGCC TGCGCGAACA TGTCGAACGC CTGTTTGCTT CGGCCCGCAT TCTGCGCATG GAAATTCCCT ATACCGTCGA CCAGCTTGTG GATGCCGTGG TGGAAACGCT GCAGCGCAAC AAACTGGACG AAGGCTATAT CCGCCCCTTG AGCTTTGTGG GCGCGGGTGC CATGGGTGTG AACCCCGGCA GCAACCCCAT ACAGACCATC ATTGCCACGT GGCCCTGGGG CGCGTATCTG GGTGAAGAGG CGCTGGAAGC GGGCATCCGC GTAAAAACCA GTTCCTTCCA GCGTCATCAT GTAAACGCCA TGATGACCAA GGCAAAGGCC GTGGGCAACT ATGTAAACTC CATTCTGGCC AAAACAGAAG CTCTTGCAGA CGGTTACGAC GAAGGGCTGA TGCTGGATAC CGCGGGATTT GTTTCTGAAG CCACCGGCGA AAACATTTTC ATCGTGCGCG GCGGCGTCAT TAAAACAACG CCCCTTACGT CCATACTGGA CGGTATCACC CGCAACAGCC TGATGACGCT GGCCGGTGAT CTGGGCTACA CCGTGGTGGA ACAGCAGTTC ACCCGCGATG AGCTGTATGT GGCCGATGAA GCCTTTTTCT GCGGCACTGC GGCGGAGGTC ACTCCCATAC GTGAAGTGGA CCGCCGCGTT ATCGGCGCCG GCAAGGCCGG ACCGGTCACC AAGCATCTGC AGACCGAGTA CTTCAAGCTT GTAAAGGGTG AAAATCCCAA GTACGCACAC TGGCTGCATC AGTATTCACT GTAG
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Protein sequence | MVQKSETIWF DGKQVAWDDA NVHVLTHTLH YGLGVFEGIR AYKCVDGTSA VFRLREHVER LFASARILRM EIPYTVDQLV DAVVETLQRN KLDEGYIRPL SFVGAGAMGV NPGSNPIQTI IATWPWGAYL GEEALEAGIR VKTSSFQRHH VNAMMTKAKA VGNYVNSILA KTEALADGYD EGLMLDTAGF VSEATGENIF IVRGGVIKTT PLTSILDGIT RNSLMTLAGD LGYTVVEQQF TRDELYVADE AFFCGTAAEV TPIREVDRRV IGAGKAGPVT KHLQTEYFKL VKGENPKYAH WLHQYSL
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