| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0054 |
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| Symbol | |
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| ID | 3755134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 42335 |
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| End bp | 45346 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637780907 |
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| Product | L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_386550 |
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| Protein GI | 78355101 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01237] delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCA TGCCAGACGA AAAAATTGTC TCGCGCGGAA AAGAATTTTT CACCAGCATC
AGCGGCGAAG CTCCGTCCAT CTTCAACAAG GGATGGTGGA CCGGCAAAGT CATGGACTGG
GCCATGAAAA ATGAAGACTT CAAAGTCCAG CTTTTCCGGT TTGTCGACGT TTTCCCGTAT
CTGAACACCT CGGAATCTCT TTCGCGGCAT ATCCGCGAAT ACTTCGCCGA AGGCGGCGAC
GTGCCCGCAG TGCTCAAATG GGGAGCCGGA AAAGCCGGCA TAGGCGGCAA ACTGACCGCC
ATGCTGATGG AAAAAACCAT CCGCTCCAAC ATTGAAAACA TGGGCCGGCA GTTCATCATC
GGCCAGAACG CCAAAGAAGC CGTCAAATCC ATAGCCAAAC TGCGCAAGGA CGGTTTTGCC
TTTACCGTGG ACCTGCTGGG CGAAGCGACT GTGAACGAGG AAGAGGCCGA CGCCTATCGC
GACGGCTATC TGGAGGTGCT TGACGCGCTG GCCAGAGAAC AGGACAAATG GTCGCCCCTG
AAAGGTCCCG GACCGGACAC GGACACAGAC TGGGGCTGCA CCCCCAGAGT CAACGTATCC
ATCAAGCCTT CCGCACTGTA TTCACAGGCC AAACCCGTGG ATATAGAAGG CTCGGTGCAG
GGCATCATGA AGCGCCTTGT GCCCGTGTAC CGCAAGGTTG TAGAAATGAA CGGCTTTCTG
TGCATTGACA TGGAAGCGCT GAAATACAAG GAAATGACGC TTGAACTGTA CCGCAGACTG
CGCAGCGAGC CGGAATTCCG TCATTATCCG CATCTTTCCA TCGTGCTGCA GGCCTATCTG
CGTGAATCGG AAAAAGACCT TGCCGACCTG CTGCACTGGG CCCGCACCGA AAAGCTGCCC
ATTGCCATCC GGCTGGTTAA GGGCGCTTAC TGGGACGCCG AAACCGTCAT AGCCAAACAG
AACGGCTGGG ACATTCCCGT ATGGGTGCAC AAACCACAGT CCGACATGTG TTTTGAACGC
ATGGCCCGCA CCATTCTTGA AAACAGCGAC ATCTGCTACT TCGCCTGCGG TTCGCACAAT
ATCCGCACCA TTGCCGCCAC CATGGAAACA GCCCGCCAGC TGGGCGTGCC CGAAACACGA
TACGAATTTC AGGTGTTGTA CGGCATGGCC GAACCGGTCC GCAAAGGCCT GCTGAATGTG
GCGGGCAGGG TGCGGCTGTA CTGCCCCTAC GGCGAGCTTA TTCCGGGCAT GGCATATCTG
GTGCGCCGCC TGCTGGAAAA CACAGCCAAC GAATCATTTC TGCGACAGAG CTTTGCCGAC
GGCACCGACA TGGAGCGGCT GCTTGAAAAT CCGGAGCTGA CCCTGCAGCG CGAGCTGGCA
GCCCGTCCGG CACCGGTGGA GCCTTCCGGC ACGGGAGGCA TTCCGCCGTT CCGCAATGAT
CCCATGATAG ACTTCACCAT ACCCGAACAG CGGGCCGCCT TTCCGCGGGC CATAGCCGAG
GTACGCGCCG CCGCAGGCGG CACCGTGCCT CTGTTCATCG GCGGCAAAGA AGTGTTCACG
CAGGACACCA TGCCAACGAC CAATCCGGCC GACCCCGATG AAAAACTCGC CGATGTATGT
CAGGCGGGCA TAGCGGAAAT CGATGCGGCC ATCGAGGCGG CGGGCAGGGC GTTTCTCATC
TGGCGCGATG TGTCACCCGA AGACCGCGCC AACTACCTGT TCAAGGCCGC GGATGCCGCA
CGCAGAAGCG CCTACAGGCT GTCCGCATGG CAGATTCTTG AAGTGGGCAA ACAGTGGGAT
CAGGCATACC ACGATGTGGG CGAAGGCATA GACTTTATGG AATACTATGC CCGCGAAATG
CTCCGGCTGG GCAGGCCCCG CCGCATGGGC CGCGCCCCCG GCGAACACAA CCACCTGTTC
TACCAACCCA AAGGCATTGC CGCCGTCATC TCGCCGTGGA ACTTTCCCTT TGCCATCTCC
ATCGGCATGG CTTCTGCGGC CATAGTGACG GGCAATCCGG TCATTTACAA ACCATCCGGC
ATTGCCGCGC GCATCGGCTA CAACCTGACA GAGGTCTTCC GCGAAGCAGG ACTGCCCGAC
GGCGTATTCA ACTACTGCCC CGGACGCAGC TCGGTCATGG GCGATTATCT TGTCGAACAC
CCCGCAATCA ACATGATCTG CTTTACCGGA TCCATGGAAG TAGGCCTGCG CATTCAGGAA
AAAGCGGCCG TTGTACAGCC CGGACAACAC CACTGCAAAC GCGTCATCGC CGAAATGGGC
GGTAAAAACG CCATTATCAT TGATGACGAT GCCGACCTTG ACGAGGCCGT GCTGCAGGTC
ATTTATTCGG CATTCGGCTT TCAGGGGCAG AAGTGCTCCG CCTGCTCGCG GGTCATCGTG
CTGGACCCCA TATACGACCG CTTTGTAAAG CGGCTGGTCG AAGCCTGCAA CGACCTGAAG
ATAGGACCGG CAGAAGATCC GGCAAACTAC ATGGGCCCGC TGGCCGATGC CTCGCTGCAG
AAAAACGTCG GCAGATACAT TGAAATAGCC AGAGAAGAAG GCACCATACT GGTTTCGCGC
GACGATATTC CCGCGCGTGG CTGCTATGTG CCGCTTACCG TGGTTGCCGA CATTACTCCC
GACAGCCGCA TAGCGCAGGA AGAAATATTC GGTCCCGTGC TTGGCGTCAT GCGGGCCTCC
ACCTTTGAAG AAGCGCTGGA AATCGCCAAC GGCACCCGTT TTGCCCTGAC CGGCGGCGTG
TTCTCGCGCA GTCCGGAACA TCTCGAAAAA GCCCGCAAAG AATTCCGCGT GGGCAACCTG
TACCTGAACA AGGGCAGCAC CGGCGCGCTG GTGGAACGGC AGGCATTCGG CGGCTTCAAG
CTTTCCGGTG TCGGCTCAAA GACCGGCGGT CCCGACTACC TGCTGCAGTT CATGGACCCG
CGCGTAGTGA CGGAAAACAC CATGCGCCGC GGATTCACCC CCATCGAAGA AGACGACGAC
TGGATTGTAT AA
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| Protein sequence | METMPDEKIV SRGKEFFTSI SGEAPSIFNK GWWTGKVMDW AMKNEDFKVQ LFRFVDVFPY
LNTSESLSRH IREYFAEGGD VPAVLKWGAG KAGIGGKLTA MLMEKTIRSN IENMGRQFII
GQNAKEAVKS IAKLRKDGFA FTVDLLGEAT VNEEEADAYR DGYLEVLDAL AREQDKWSPL
KGPGPDTDTD WGCTPRVNVS IKPSALYSQA KPVDIEGSVQ GIMKRLVPVY RKVVEMNGFL
CIDMEALKYK EMTLELYRRL RSEPEFRHYP HLSIVLQAYL RESEKDLADL LHWARTEKLP
IAIRLVKGAY WDAETVIAKQ NGWDIPVWVH KPQSDMCFER MARTILENSD ICYFACGSHN
IRTIAATMET ARQLGVPETR YEFQVLYGMA EPVRKGLLNV AGRVRLYCPY GELIPGMAYL
VRRLLENTAN ESFLRQSFAD GTDMERLLEN PELTLQRELA ARPAPVEPSG TGGIPPFRND
PMIDFTIPEQ RAAFPRAIAE VRAAAGGTVP LFIGGKEVFT QDTMPTTNPA DPDEKLADVC
QAGIAEIDAA IEAAGRAFLI WRDVSPEDRA NYLFKAADAA RRSAYRLSAW QILEVGKQWD
QAYHDVGEGI DFMEYYAREM LRLGRPRRMG RAPGEHNHLF YQPKGIAAVI SPWNFPFAIS
IGMASAAIVT GNPVIYKPSG IAARIGYNLT EVFREAGLPD GVFNYCPGRS SVMGDYLVEH
PAINMICFTG SMEVGLRIQE KAAVVQPGQH HCKRVIAEMG GKNAIIIDDD ADLDEAVLQV
IYSAFGFQGQ KCSACSRVIV LDPIYDRFVK RLVEACNDLK IGPAEDPANY MGPLADASLQ
KNVGRYIEIA REEGTILVSR DDIPARGCYV PLTVVADITP DSRIAQEEIF GPVLGVMRAS
TFEEALEIAN GTRFALTGGV FSRSPEHLEK ARKEFRVGNL YLNKGSTGAL VERQAFGGFK
LSGVGSKTGG PDYLLQFMDP RVVTENTMRR GFTPIEEDDD WIV
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