Gene Dde_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0021 
Symbol 
ID3755963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp18872 
End bp19813 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content53% 
IMG OID637780874 
ProductABC-type transport system involved in resistance to organic solvents periplasmic component-like 
Protein accessionYP_386517 
Protein GI78355068 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.577639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGACA GAAAACATAC AACAAAAGAG ATGGTCAGAG CGGGCCTGAC AATAACGCTG 
GGGCTCGCGG TGCTGGGGCT TTTCATTGTG GCTTTCGGCG GACACAGATT CTGGGAAAAG
CTCGACACCT ATCACATCAG ATTTCTGACG GTGAAAGATC TTTCAGTGGG GCGGCCGGTA
AAATATGCAG GTATCAACAT CGGGCGTGTG CTAGATATTT CTGTGGATAA GATGGACCCG
GGGCAGGTGC ATGTGACCAT CGGCGTGCAG CAGGATTTTG CCGTATATCA GGGCACAGTG
GCCAGCATAA CCCAAAAGGG ACTGGTGGGA GATAACTACG TTCTGCTGAG CCTGAAAGCC
CGGCCCGGAC AAAAACTGCC GGTACAGAGC GAAATACCCG CAGATACCAG CACTTCGATC
TTTGAAGCGG CTGCTTCCGT GGGGCATCTT GTTCAGGAGC TGCATCCCAA GCTGGTACGC
ATAGCCGACA GCCTTGATAT ACTGCTTGCC ACGATAAACA GTCAGGACAT GGCAGGAGTG
ACCCGGAACA TGAATGCCGT GCTGCACAAC GCAGCACAGG GCATAAAGAC CATGACAACA
GAGATACAGG CTGTAAGCGG CGATGCCAGA CAGGGAATAC GTGAAGCGCG CAACGTGATG
CGCACAGTGC AGGGCAGCGC GCACAAAGCC GATGAAGCGC TGGAAAGCAC TCGTCTGGCC
ATGGAAGCAG TACGGATGCA GACCGAAACG CTGGGCGGCA TGCTGACGGC GCTTTCCGGC
AGGTTTGAAG AAAACATGGA ATACGATCAG GCACAGGTGG AAGAAATTTT ACGCAACACG
CGGGAACTGA CAGAAAATCT CAATCTGCTT TCGCGCTCTC TGCGGGACAG ACCATGGCAG
ATTATCTTTC ATCCGGACGA ATCACACGAA ATAACGAGAT AA
 
Protein sequence
MLDRKHTTKE MVRAGLTITL GLAVLGLFIV AFGGHRFWEK LDTYHIRFLT VKDLSVGRPV 
KYAGINIGRV LDISVDKMDP GQVHVTIGVQ QDFAVYQGTV ASITQKGLVG DNYVLLSLKA
RPGQKLPVQS EIPADTSTSI FEAAASVGHL VQELHPKLVR IADSLDILLA TINSQDMAGV
TRNMNAVLHN AAQGIKTMTT EIQAVSGDAR QGIREARNVM RTVQGSAHKA DEALESTRLA
MEAVRMQTET LGGMLTALSG RFEENMEYDQ AQVEEILRNT RELTENLNLL SRSLRDRPWQ
IIFHPDESHE ITR