| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0017 |
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| Symbol | |
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| ID | 3755959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 16213 |
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| End bp | 17547 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637780870 |
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| Product | sun protein |
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| Protein accession | YP_386513 |
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| Protein GI | 78355064 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC AGTCCCCTCG CCGTGGCGGT GTTGCAACAC TTCCTCCGGC ACGAGGTGCC
GCTTTGGAAA TATTGCGCGA TGTGCTTGAT AAAAAGCGTG AAGCACAGAG TGTGCTGGAC
AGTTACCTTA AAGACAACAG ATTAAGCCCT CAGGATGCCG CTCTGTGCAC GGAGCTTGTG
TATGGATACC TGAGGTCGGA AATCAGAATT TCGTGGCTTA TACGCCGTTT TTTAAAGCCG
GATTCACGGC TGCCCGCGGA GCTTTTGCTG ACAATGGGTA TTTCTGTGTA TGAAATACTG
TATTTACAGC GTGTTCCTGT ATATGCGTCG GTGGACTGGG CTGTTTCGTA TGTGCGTTCG
CGGTTCGGAA CGGGACTTTC GCGTCTGGCC AACGCTGTTT TGCGCAGCAT CGACCGGCTG
GGCGATGCTC CGCTGCAATC CGGCTGGTAT CGTGAAACGC TGCAGGCCGA AGGCGTTGAT
ACCGCAGGAT ATCTGTCGGT ATGGTATGCC GCTCCGCGGT GGGTTGTTGA TATGTGGATT
GAAGCATATG GCGAGGAACG TGCTGAGCAG TATCTTGCCG GTTCATCACG TCACGCTCCT
GCCGGGGTGC GCATCAACCT GCGGCATCCC GAAGGGCCAC AGACGCATGC CCGCCTGACC
GCTCATCCTT CATGTATCGG GCACAGTGCC GCAGGATTGC TTTTTGCTTC CGACTCCCGC
CCTGCCGAAC TGTATGTTCT GCAGGAGGAG GGAATAGCTT CGTCGCAGTC TTTTGCCGTG
CAGGAAGTTA TGGACGCACT GCGTCCCGAA ACATGGGAAG GCCCTGTGTG GGACTGCTGC
TGCGGACGCG GCGGTAAAAC ATGTTCGCTG CTCGAACGGG GCGTGGATGT ATGTGCAGCC
AGTGATCCCA GTGAAAAACG TCTTAAAGGG CTGCGTACGG AGCTGGAGCG GCTGGGGCTG
CCTGATGTTC CGTTGTTTGC GGCTCCCGCC TCGCAGGTTC CGGAGGGTAT AGCTCCTCGT
GCCGTGCTGG CTGATGTGCC CTGCTCCGGA CTTGGTACGC TTTCACGCCG TCCCGACATA
CGGCAGCACC GCACTCCCTA TTCCATGGCG CGGCTGGTTA CGCTGCAGTC GGAAATTCTG
GACAATGTCT GGCAGGTTCT GCCCGCCGGC GGCCTGCTTG CTTACATTAC CTGTACTCTG
AATCCCGAGG AAAACGAACT GCAGATAGCC CGGTTTATGG AGCGCAGCCA GGCACAGCTG
ATGCTGGAGT GGACGACTCC GCCCGACAGC CCTGCGTGTG AATATTTTTA CGCGGCGCTG
CTGCGCAAAG CGTGA
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| Protein sequence | MKKQSPRRGG VATLPPARGA ALEILRDVLD KKREAQSVLD SYLKDNRLSP QDAALCTELV
YGYLRSEIRI SWLIRRFLKP DSRLPAELLL TMGISVYEIL YLQRVPVYAS VDWAVSYVRS
RFGTGLSRLA NAVLRSIDRL GDAPLQSGWY RETLQAEGVD TAGYLSVWYA APRWVVDMWI
EAYGEERAEQ YLAGSSRHAP AGVRINLRHP EGPQTHARLT AHPSCIGHSA AGLLFASDSR
PAELYVLQEE GIASSQSFAV QEVMDALRPE TWEGPVWDCC CGRGGKTCSL LERGVDVCAA
SDPSEKRLKG LRTELERLGL PDVPLFAAPA SQVPEGIAPR AVLADVPCSG LGTLSRRPDI
RQHRTPYSMA RLVTLQSEIL DNVWQVLPAG GLLAYITCTL NPEENELQIA RFMERSQAQL
MLEWTTPPDS PACEYFYAAL LRKA
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