Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0004 |
Symbol | |
ID | 3755946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 5212 |
End bp | 7647 |
Gene Length | 2436 bp |
Protein Length | 811 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637780857 |
Product | DNA gyrase subunit A |
Protein accession | YP_386500 |
Protein GI | 78355051 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.882068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCAATC AGGTTACCAT CGAAGACGAG CTTAAGAAGT CATATCTTGA GTACTCGCTG AGTGTTATTA TAGGCCGCGC CATTCCCGAT GTGCGCGATG GCCTGAAGCC CGTGCACCGG CGCATCATGT TCGCCCAGCA CGAGCTGGGC AACGGGTATA ACCGTGCGCC GAAAAAATCG GCCCGTGTGG TCGGTGACGT TATCGGTAAA TACCACCCGC ATGGCGATTT CGCCGTGTAC GATGCCCTTG TGCGCATGGC ACAGGATTTT TCCATGCGCG ACCCGCTTGT CACCGGTCAG GGCAACTTCG GTTCCATTGA CGGCGATTCC GCGGCAGCCA TGCGTTATAC CGAAGTGCGC ATGTCGAGAC TCGCTTCGGA ATTCATGGCC GATATAGACA AGGAAACCGT CGAGTTCCGC CCCAACTATG ACAATACCCT GCAGGAACCC GCGGTGCTGC CCACCAAGGT GCCCAACCTG CTGCTTAACG GCTCTTCGGG TATTGCCGTG GGTATGGCCA CCAATATTCC GCCGCACAAC CTCGGCGAAC TGGTTGACGG CCTGCTGCTG GAACTGGACT CTCCGGAATG CACGGTGGCT GATCTTGCCG GGCTGGTCAA AGGGCCCGAC TTTCCCACCG GCGGCTTCTG CTACGCGGGC AGAGGACTGC GCGATGCGTA TGAAACAGGA CGGGGCACTG TTAAAATCCG CGGCCGTGTG GAAGTGGAAG AACGCAAAAA AGGCTTCCAG TCCATTGTCA TCCGCGAAAT ACCCTATGCG CTGAACAAGT CATCGCTTGT CGAAAAAATA GCCGCGCTGG CCAACGAACG CAGGATAGAA GGCATAACCG ACCTGCGTGA CGAATCTGAC AGACGCGGTA TCCGCGTGGT CATAGACCTG AAGCGCGGCA CCATTCCCGA AATCGTCATT AACCAGCTGT ATAAATATAC TCCGCTGGAG ACGTCTTTCG GCATCAATAT GCTGGCTGTG GTGGGCAACA GGCCCCAGCT GCTTACGCTG AAAAAGGTCT TTGAGTGCTT TTTGCAGCAC CGGCGCGAAG TCATTATCCG CAGAACACAC TATGACCTGC GCAAGGCCGA AGCCCGTGCC CATATTCTGG AAGGTCTGCG TATCGCGCTG GATAACATCG ACGAAGTGGT CGAACTTATC CGTGCATCCA AAACACCGCC GGAAGCAAAA GAACGGCTCA TGCAGCGGTT CTCGCTTTCC GAAGTGCAGG CTCAGGCCAT TCTTGATATG CGTCTGCAGC GTCTTACCAA CCTCGAACAC GAAAAACTGA TCGAGGAATA CCGCGAGCTG CTTAAAAAGA TCGAATACTT CAAGTCCATT CTGGAAAATG AAGAAGTGCT GCGCGGCGTT ATCCGTGACG AGCTTAAAGA GCTCAAGGAA ACATACGCCA CCCCGCGGCG GACCGAAATG CTGGAAGATG AACTTGAAGG AATAGACATC GAGGACCTTA TTCCCGACGA GGATGTGGTC ATCACACTGT CGCGGCGCGG GTACATCAAG CGTACTCCGC TGGACAGCTA TCAGCAGCAG CGCCGCGGCG GTAAGGGCAT TGCCGGTGTG CATACCGGCG ATGGTGACTT TGTGCAGGAT TTTCTGGTGA CTACAAACCA CCAGTACCTG CTGCTGTTCA CCAACAAAGG GCGCATGTTC CAGCTTAAGG TGCATCAGGT GCCCGAAGGC AGTCGTACCG CCAAGGGAAT GCACATCAAC AACCTGCTGC CCATGGAAGA AAACGAATGG GTGAACACCG CGCTGACTAT CCGTGAATTC ACGGAAGAAA AGTATTTCCT TTTCTCCACC CGCAAAGGCA TGGTCAAGCG CTCCAGCGCA TCGCTGTATG CCAAGGCCCG TCGTACAGGG CTTATTGCCG TGGGGCTGCG TGAAGGAGAT GAGCTTATCA TGGTGCGCGA GGTGGATGAC AACTGCGAAG TTGTTCTGAC CACCGAAAAA GGTATCGCCA TACGCTTCGG CTGCGGCGAT GTGCGCCCCA TGGGGCGTTC CGCTACCGGC GTCAAAGGCA TTGCGCTGAG TCAGGACGAC AGTGTGGTGG CCTGCGTTAC CGTGCAGGGC GGACTGGAAT CGGAAATAAT GACCGTTTCG CGGTACGGAT ACGGTAAACG GACACTTATC GATCGGTACC GTGTACAGAG CCGCGGCGGT AAAGGTGTCA TCAACTTCAA GGTGACACCC AAGACCGGTG AAGTGCTGGG CGCCATGACC GTAGTATCCA ACGACCAGCT GATTCTGCTT ACCTCCACCA ACAAGATTAT CCGCATAGGT GTGAAAGAGG TCCGCAGTGT GGGCCGCGCC ACACAGGGCG TGCGTCTTGT CTGGCTGGAC GAAGGCGACC ATGTGGTCGG CTTTGACAGA GTTTCGGAGC AGGAACAGGA ACAGCTTGAC GATTAG
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Protein sequence | MSNQVTIEDE LKKSYLEYSL SVIIGRAIPD VRDGLKPVHR RIMFAQHELG NGYNRAPKKS ARVVGDVIGK YHPHGDFAVY DALVRMAQDF SMRDPLVTGQ GNFGSIDGDS AAAMRYTEVR MSRLASEFMA DIDKETVEFR PNYDNTLQEP AVLPTKVPNL LLNGSSGIAV GMATNIPPHN LGELVDGLLL ELDSPECTVA DLAGLVKGPD FPTGGFCYAG RGLRDAYETG RGTVKIRGRV EVEERKKGFQ SIVIREIPYA LNKSSLVEKI AALANERRIE GITDLRDESD RRGIRVVIDL KRGTIPEIVI NQLYKYTPLE TSFGINMLAV VGNRPQLLTL KKVFECFLQH RREVIIRRTH YDLRKAEARA HILEGLRIAL DNIDEVVELI RASKTPPEAK ERLMQRFSLS EVQAQAILDM RLQRLTNLEH EKLIEEYREL LKKIEYFKSI LENEEVLRGV IRDELKELKE TYATPRRTEM LEDELEGIDI EDLIPDEDVV ITLSRRGYIK RTPLDSYQQQ RRGGKGIAGV HTGDGDFVQD FLVTTNHQYL LLFTNKGRMF QLKVHQVPEG SRTAKGMHIN NLLPMEENEW VNTALTIREF TEEKYFLFST RKGMVKRSSA SLYAKARRTG LIAVGLREGD ELIMVREVDD NCEVVLTTEK GIAIRFGCGD VRPMGRSATG VKGIALSQDD SVVACVTVQG GLESEIMTVS RYGYGKRTLI DRYRVQSRGG KGVINFKVTP KTGEVLGAMT VVSNDQLILL TSTNKIIRIG VKEVRSVGRA TQGVRLVWLD EGDHVVGFDR VSEQEQEQLD D
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