Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0003 |
Symbol | |
ID | 3755945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2797 |
End bp | 5190 |
Gene Length | 2394 bp |
Protein Length | 797 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637780856 |
Product | DNA gyrase subunit B |
Protein accession | YP_386499 |
Protein GI | 78355050 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.561355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAACG AGACACAAAA GCAGAGCTAC GACGCGGCGA ACATCACCGT TCTTGAGGGG TTGTCCGCTG TGCGCATGCG CCCTGCCATG TACATAGGCA GCACTGACAG CCGCGGTCTG CACCATCTGG TTTACGAAGT GGTGGATAAC TCCATCGACG AAGCCATGGC GGGATACTGC GATAAAGTCA CCGTGAAGCT GCATCTTGAT AACAGCGTGA CCGTTATTGA TAACGGACGC GGCATTCCCG TGGACATCCA CCCGAAAGAA GGCCGTCCCG CGGTTGAAGT GGTCATGACC GTGCTGCATG CCGGCGGCAA GTTCGACAAC GATTCGTACA AGGTGTCGGG CGGGCTGCAC GGGGTGGGTG TTTCGTGCGT GAACGCCCTT TCCGAATATC TCGAAGTTAC CGTGCGTCGT GACGGGTATA AATATCATCA CCGCTTTGAA CGCGGTGTAC CGGTCAAGGA ACTGGAGCGC GTCGGAGAAA CCGACCTGCG CGGCACCACC ATCCGCTTCC GTCCGGACGA AGAAATTTTT GAGACCAATC AGTTTTCCTT CGATATCCTC AAAAAACGCT TTGAGGAGCT CGCGTACCTC AATCCCGGGC TCGAGGTCGA GTTCATAGAC GAACGTACCG GAGATACCGC CTCGTTTCAT TACGAGGGGG GTATCCGTGA GTTTGTGAAG AACCTGAACT CCGGCGAAGG CGGGGTGCAC TCCATCATTT TCGCTTCGGG CGAATCGGAT AACGTGATGG TGGATTTCGC GTTGCAGTAC AACGCGGGGT ATAAGGAAAA CATGCTCACC TTTGCCAACA ACATCCGCAC CAAGGAAGGC GGCACGCACC TTGCCGGCTT CAAGACCGCG CTCACAAGGG CCATCAACAA CTACATCCAG AACTCCGACC TGCCTAAAAA GCTCAAGGTC AAACTGTCGG GTGATGATGT GCGGGAAGGT CTGACCGGCG TTGTCAGTGT TAAACTGCCC AATCCGCAGT TTGAAGGGCA GACAAAGACC AAGCTGGGCA ACAGCGAGGT GGCGGGTATT GTCTCCGGTC TGGTGTATGA AAATCTCAAC ACCTACTTCG GCGAAAACCC CAAAGATGCC AAGCTGATCA TAGAAAAGGC CGTGGATGCC GCCCGTGCAC GTGACGCCGC CCGCAAGGCG AAGGATCTTG TACGGCGCAA AGGGGCGCTT TCCGACAATG CCCTGCCCGG CAAGCTGGCT GACTGCCAGA GCAAGGATCC CTCGGAATCC GAACTGTTCA TCGTGGAAGG TGACTCCGCA GGCGGTTCTG CAAAACAGGG GCGCAATCCT TCCACTCAGG CCATTCTGCC GTTGCGCGGT AAAATTCTGA ACGTGGAAAA GACCCGCTTT GACAAGATGC TGGCCAACAA GGAAGTCAAG GCTCTCATCA CGGCCATGGG GGCGGGAATA GGCGAAGAAG ACATCGACTA CGGCAAGCTG CGGTACCACA AAATCGTCAT CATGACCGAC GCCGACGTGG ACGGTGCCCA CATACGCACG CTGCTGCTGA CGTTCTTCTA TCGCCAGTAT CCCGAGCTGA TAGACAGGGG GCACCTGTAT ATCGCCCAGC CGCCGCTTTT CCGTGTGTAC AACAGCAAGT TCGAGCGGTT TATCAAAGAT GAAACCGAGC TGAACACCTA TCTGCTGGAA CGCATTGCCA AAGACGTCGT CATCGAGGCG CATAACGGCA TGGAGTTCCG TGAAACGCAG ATACTCGACC TGCTGAAAGC CATACGGTTC ATCAATGCCA GAATTGCCGA CGTGGAAAAC GTGGGAATAG GCCGTAATCT CTTTCTCGCG TTTCTTGAAT ACGGCGAAAA ACTGTCGCCC CAGTTTTTTG AGGCGCCTGA ATTCAACGGC TTCGGAACGT ATCTGCAGGA AAAAGGCTAT TCCGTGCAGA CCAGCGTTGA CGAATCCGGA CTGGAACGCC GTGTGTACCT GGAATTTGAA GACAGCAACG GGCACAAGAC CCGCATCGGC AACGAGTTCT TCAACTCCAA GATGTACAAA CAGCCTTACG ATTCGATGGC CGACATGCGC CGCATCTGCG GCGGATTCTC GTTTGTGGTG GACCGCAAGG GCGAACGGAC CGAAGTGGAA AACATCTTCG TTCTGCTGGA CCATGTGCTG CAGGAAGCGC GCAAGGGTAT AAACATCCAG CGGTATAAAG GTCTGGGCGA AATGGATGCC GAACAGCTTT GGGTGACCAC CATGAACCCC GAAAACCGCG TGCTGCTGCA GGTACAGGTG GATGACGCGG AAGAGGCCAA CGAGATATTT GAACAGCTCA TGGGCGACAG GGTTGAACCG CGCCGCGAAT TCATCGTGCG TAATGCCCTG AGCGTTCAGG AACTGGATAT TTAA
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Protein sequence | MTNETQKQSY DAANITVLEG LSAVRMRPAM YIGSTDSRGL HHLVYEVVDN SIDEAMAGYC DKVTVKLHLD NSVTVIDNGR GIPVDIHPKE GRPAVEVVMT VLHAGGKFDN DSYKVSGGLH GVGVSCVNAL SEYLEVTVRR DGYKYHHRFE RGVPVKELER VGETDLRGTT IRFRPDEEIF ETNQFSFDIL KKRFEELAYL NPGLEVEFID ERTGDTASFH YEGGIREFVK NLNSGEGGVH SIIFASGESD NVMVDFALQY NAGYKENMLT FANNIRTKEG GTHLAGFKTA LTRAINNYIQ NSDLPKKLKV KLSGDDVREG LTGVVSVKLP NPQFEGQTKT KLGNSEVAGI VSGLVYENLN TYFGENPKDA KLIIEKAVDA ARARDAARKA KDLVRRKGAL SDNALPGKLA DCQSKDPSES ELFIVEGDSA GGSAKQGRNP STQAILPLRG KILNVEKTRF DKMLANKEVK ALITAMGAGI GEEDIDYGKL RYHKIVIMTD ADVDGAHIRT LLLTFFYRQY PELIDRGHLY IAQPPLFRVY NSKFERFIKD ETELNTYLLE RIAKDVVIEA HNGMEFRETQ ILDLLKAIRF INARIADVEN VGIGRNLFLA FLEYGEKLSP QFFEAPEFNG FGTYLQEKGY SVQTSVDESG LERRVYLEFE DSNGHKTRIG NEFFNSKMYK QPYDSMADMR RICGGFSFVV DRKGERTEVE NIFVLLDHVL QEARKGINIQ RYKGLGEMDA EQLWVTTMNP ENRVLLQVQV DDAEEANEIF EQLMGDRVEP RREFIVRNAL SVQELDI
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