| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3557 |
|---|
| Symbol | |
|---|
| ID | 3739856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3989991 |
|---|
| End bp | 3990731 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637780846 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_386487 |
|---|
| Protein GI | 78224740 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 0.726409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATG CCATGCTCAA GAAAGGCGCC ACCCTGCTTA TCCCCCTGAT GCTGATCTCG
GCCTGCACCC CCTACCGGAG CCAGTACGTC GGTTTCCGGC CCGCCGAGGA CTACGTGAAC
CGGCTCGTGG TAAGCGGCGT CACCATCGGC GGCGAGGCCT ACGCCGACAG CGGGGCCGCC
CAGAACGCCT TCGGCTTCGA CATCAAGGGG AGCGGCCTCA TTCCCGTTCA GATCGTCATG
ACCAACCAGG GAGCGAAAAA CATGGAGATT GTCTCCAATC AGACCTTCCT GGTGAACGAC
CAGAACCGCT ACTTCCAGGT GGTCCCCAAC GCGGTGGCCG TGGACCGGAT CGAGAAATCG
ACCCAGTTCG CCTCCTTCTT CGGAAGTGAA ACCGGAAAGG GTGCCATTCT TGGCGCCGTC
GGTGGTGCCG TTCTCGGCGC TGCAATTGGC ATTGTCTCCG GGCAGAGCAT CGGCGAGGCG
GTCGGCAAGG GGGCTGCCAT CGGTGGTGCC GGTGGTGCCG TTGCCGGCGG CCTCAAGGGG
GGAACCTCGG GGGAACGGGA GCGATCCATT ATCAACGACA TTCGGGCCAA GGGGCTGGAA
GGGAAGACCC TCCCGGCCGG GAGCATCGCC AGCGGCTTCC TCTTCTTCCC TGCCGAGGCG
GATACGGCGC GGGAACTGCG GATGCAGCTC CGGGACCAGA ACACCGGCTC GCTCCACAGC
GTGGTTCTGA AATTCAAGTA G
|
|---|
| Protein sequence | MKHAMLKKGA TLLIPLMLIS ACTPYRSQYV GFRPAEDYVN RLVVSGVTIG GEAYADSGAA
QNAFGFDIKG SGLIPVQIVM TNQGAKNMEI VSNQTFLVND QNRYFQVVPN AVAVDRIEKS
TQFASFFGSE TGKGAILGAV GGAVLGAAIG IVSGQSIGEA VGKGAAIGGA GGAVAGGLKG
GTSGERERSI INDIRAKGLE GKTLPAGSIA SGFLFFPAEA DTARELRMQL RDQNTGSLHS
VVLKFK
|
|---|
| |