| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3551 |
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| Symbol | |
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| ID | 3739810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3985948 |
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| End bp | 3987435 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637780840 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_386481 |
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| Protein GI | 78224734 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0051763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACTT TCTTGACAGC CGCCCATGCA GGGTCTATCA ATGATCAGAG TGCATTCATC
GAACGGCGAG GAGCAGGGAT GAAAAAAGTT ATCGTGGTGG GGGGCGGCAT TTCTGGGCTC
GCAACCGCCT TTGAGCTGCG CAATAAAGGA GCAGAGGCGG GCATCGAGCT GGATGTGACC
CTGCTGGAAA AGGAAGAGCG GGTCGGCGGC AAGATCTGGA GCATCAAGGA GGAGGGATAC
CTCTGCGAGT GGGGGCCCAA CGGCTTTCTG GACTCCAAGC CCCAGACCCT CGACCTCTGC
CGGGACCTGG GTGCCTCGGA AAGGCTCCTG CGGAGTAACG ATAACGCCCG TAAGCGCTTC
ATCTACACCG GGGGCGTTCT GAACCGGCTC CCCGAGAACG GCCCCACGTT TCTCAAGAGC
AGCCTCATCT CGTGGCCCGG CAAACTCCGC TTGGCAATGG AACCCTTCAT CTCGAAGCGG
ACCGACGGCA CCGACGAGAC CCTCGCCTCC TTTGGCCGCC GGCGCCTCGG CGAGGAGGCC
CTCCAGAAGC TCATCTCCCC CATGGTGTCG GGGATCTTCG CCGGCGACCC GGAAACCATG
TCGCTCCGCT CCTGCTTCCC CCGCATCGCG GAACTGGAGG ACGAATACGG TAGCCTCATA
AAAGCCATGA TCAAACTGGC GAAAAAGAAG AAGCAGGAAG CGGCCCAGGG AAAGGCGGTA
TCGAGCGCCG CCGGCCCCGG TGGAGTCCTC ACCTCTTTCC GATGGGGGAT CCAGGAGCTG
ACCGACATCC TGGCGGAGCA GCTCGGTTCC GCGACCGTGG TTACGGGTCA GCCCGTGACG
GGCTTGACCA GGGGATCGAG CGTCCCGTGG CGGCTGAAGA CACCCACCGT CGATATCGAC
GCCGACGTGG TGATTCTCGC CTCGCCGGCC CATGCCACCG CCGGCATCGT CAGCGGCGTT
GACGCCGCCA TGGCCCAGGT GCTGGGGGAG ATCCCCTACG CCTCCATGAC CGTGGTCTGC
TTCGGCTTCG AACGGGAGCG GATCGCCTAC GACCTGAACG GCTTCGGCTA CCTGATCCCC
AAGGATGAGG GGATGAACAC CCTCGGTACC CTCTGGGACT CCAGCATCTT CGAAAACCGT
GCCCCAGAGG GTAAGGTGTT ACTGCGGAGC ATGCTCGGCG GCGCCTGCTT CCCCGAGTAC
GTGAAACTTT CCGACGCGGA GGTGATGCAG CGGGTGAAGG CAGATCTCAA GGCGACCATG
GGAATCACGG CGGACCCCTC CTTCATCAGG ATCTTCCGCC ATCCCCAGGC CATCCCCCAG
TACACCGTCG GCCACGGAAA GCGCTTGGCG GCCCTCCAGG AACGCTCCTC GGCCCTCCCG
GGGCTCTTCC TTACCGGAAA CTCCTACCGC GGCATCGGCC TCAACGACTG CGCCACCGCC
GCCAACCGCA CCACCGACGA GGTGGTGGCC TATCTGAAGG GCCGATAG
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| Protein sequence | MFTFLTAAHA GSINDQSAFI ERRGAGMKKV IVVGGGISGL ATAFELRNKG AEAGIELDVT
LLEKEERVGG KIWSIKEEGY LCEWGPNGFL DSKPQTLDLC RDLGASERLL RSNDNARKRF
IYTGGVLNRL PENGPTFLKS SLISWPGKLR LAMEPFISKR TDGTDETLAS FGRRRLGEEA
LQKLISPMVS GIFAGDPETM SLRSCFPRIA ELEDEYGSLI KAMIKLAKKK KQEAAQGKAV
SSAAGPGGVL TSFRWGIQEL TDILAEQLGS ATVVTGQPVT GLTRGSSVPW RLKTPTVDID
ADVVILASPA HATAGIVSGV DAAMAQVLGE IPYASMTVVC FGFERERIAY DLNGFGYLIP
KDEGMNTLGT LWDSSIFENR APEGKVLLRS MLGGACFPEY VKLSDAEVMQ RVKADLKATM
GITADPSFIR IFRHPQAIPQ YTVGHGKRLA ALQERSSALP GLFLTGNSYR GIGLNDCATA
ANRTTDEVVA YLKGR
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