Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3546 |
Symbol | |
ID | 3739805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3978210 |
End bp | 3979091 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637780835 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_386476 |
Protein GI | 78224729 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.000394958 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACC TCCTGTTCCG TTGCCTGGGA ATTCCGATCG TCATCACCAC CTTCTTCGTC TCCGTCGGCA GTGAAACGCC GGCCGCCGCC TCCCCGGCGG GGAAGAAAAA AACCGAGTCC ACCGAAGTCG CGGCCTCTTC CCCGGCGAAG CCGGCCCTTG CCTATGCCGA GTATGTGCGT CTCGTAAGCA GGCGGGGTGT CGCCGGGCGT GGCCACGCCA AAAAGAAGCC GGCGAAGGCG GCAAAGGTGA CCCGTACTGC AAAGAAAGCG GACCAGAAGG TGGTTTCCGC AAAAGCCGAG CCGACGCCGG TCGTTCCCGT CCGGACCGTT GCGCCGGTCG TGGCAGTCGA GCCGAAGCGG GGAGGGGGAT GGCGGCCCGG TCCGGCAGAG GTGCGCGAGG TCCTTGGCAC GACCCGCGAT CTGTCGGGGG CGAACCTGCG GGGGATGAAC CTGGCCGGCC TTGATCTGCG CAACGCCTCC CTGGCCAATG CCGACCTCTA CCTGGCTAAT TTGGCGGGGG CGTGCCTCGA CGGGGCGAAC CTGCGAGGGA CATCCCTCGA AATGGCCAAT CTGCGGGGGG CAAGCCTCAA GGGGGCCAAG CTCTCGGGGG CCGGCCTCTT CATGACGAAC CTGGAAGGGG CCGACCTGGA GCGGGCGGAC CTGACGGGTG TCTATGCCGT GGGGGCGAAC CTGCGGGGTG CAGCGCTGGC AAGCGCAAAC CTACGGGGCG GGCTCTTCAC CAATGCGGTC ATGGCGCGGA GCGTGGCGGT GCTGACGGAG GATGGAGAGG GGAGGGGGGG CGGCACGGTG ACAAAGGCGA CGGCACGGGA CGATGCAGCT CGACCCGACC CGGCCGAACG GCTCACGTTC CTCAAATTCT GA
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Protein sequence | MKHLLFRCLG IPIVITTFFV SVGSETPAAA SPAGKKKTES TEVAASSPAK PALAYAEYVR LVSRRGVAGR GHAKKKPAKA AKVTRTAKKA DQKVVSAKAE PTPVVPVRTV APVVAVEPKR GGGWRPGPAE VREVLGTTRD LSGANLRGMN LAGLDLRNAS LANADLYLAN LAGACLDGAN LRGTSLEMAN LRGASLKGAK LSGAGLFMTN LEGADLERAD LTGVYAVGAN LRGAALASAN LRGGLFTNAV MARSVAVLTE DGEGRGGGTV TKATARDDAA RPDPAERLTF LKF
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